Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- endoplasmic reticulum 1
- plasma membrane 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G130200.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 95.49 | 95.49 |
| HORVU2Hr1G019280.1 | Barley | cytosol | 77.98 | 77.57 |
| Os07t0673700-01 | Rice | cytosol | 76.92 | 76.52 |
| EER97716 | Sorghum | plastid | 76.39 | 76.19 |
| Zm00001d007152_P001 | Maize | plastid | 73.74 | 73.94 |
| TraesCS2D01G111900.1 | Wheat | nucleus | 72.94 | 60.44 |
| GSMUA_Achr2P14860_001 | Banana | cytosol, endoplasmic reticulum, plastid | 51.72 | 52.28 |
| KRG89620 | Soybean | cytosol | 16.71 | 47.01 |
| VIT_07s0031g01580.t01 | Wine grape | plastid | 38.99 | 40.72 |
| Solyc04g051870.1.1 | Tomato | extracellular | 38.46 | 40.62 |
| PGSC0003DMT400042717 | Potato | cytosol | 38.46 | 40.62 |
| KRH64149 | Soybean | cytosol | 38.46 | 40.39 |
| KRH53797 | Soybean | cytosol | 38.73 | 40.33 |
| CDY46225 | Canola | cytosol | 38.73 | 39.57 |
| Bra030269.1-P | Field mustard | cytosol | 38.46 | 39.3 |
| CDY15853 | Canola | cytosol | 38.2 | 39.02 |
| AT2G21950.1 | Thale cress | cytosol | 36.6 | 37.1 |
| CDY15875 | Canola | cytosol | 21.22 | 26.4 |
| CDY13796 | Canola | cytosol | 26.53 | 26.18 |
| Bra030282.1-P | Field mustard | cytosol | 22.02 | 25.7 |
| Bra030283.1-P | Field mustard | cytosol | 19.36 | 25.52 |
| CDY59764 | Canola | cytosol | 26.26 | 25.52 |
| Bra031212.1-P | Field mustard | cytosol | 26.26 | 25.45 |
| CDY13795 | Canola | cytosol | 26.26 | 25.26 |
| CDX99573 | Canola | cytosol | 20.69 | 24.22 |
| CDY56757 | Canola | plastid | 24.14 | 24.2 |
| CDX99574 | Canola | cytosol | 21.49 | 23.82 |
| AT2G29770.1 | Thale cress | cytosol | 24.4 | 23.77 |
| AT2G29810.1 | Thale cress | cytosol | 24.14 | 23.76 |
| Bra033610.1-P | Field mustard | plastid | 23.61 | 23.67 |
| AT2G29860.1 | Thale cress | cytosol | 14.85 | 23.33 |
| CDY15078 | Canola | extracellular | 17.24 | 22.97 |
| AT2G29830.1 | Thale cress | cytosol | 22.81 | 22.45 |
| AT3G27910.1 | Thale cress | extracellular, golgi | 17.51 | 22.45 |
| AT4G14905.2 | Thale cress | plastid | 22.02 | 22.31 |
| CDY69098 | Canola | cytosol, plastid | 22.02 | 22.25 |
| Bra025310.1-P | Field mustard | cytosol, plastid | 22.02 | 22.25 |
| AT2G29780.1 | Thale cress | cytosol | 23.34 | 22.11 |
| CDY15873 | Canola | cytosol | 9.55 | 22.09 |
| CDY44445 | Canola | cytosol | 21.49 | 21.66 |
| Bra033606.1-P | Field mustard | cytosol | 22.81 | 21.39 |
| AT2G29820.1 | Thale cress | cytosol | 22.02 | 21.39 |
| AT4G39240.1 | Thale cress | cytosol, nucleus, peroxisome | 21.22 | 21.33 |
| AT1G19460.1 | Thale cress | cytosol | 23.34 | 21.15 |
| AT1G19470.1 | Thale cress | cytosol | 22.55 | 20.63 |
| AT2G21680.1 | Thale cress | cytosol | 22.28 | 19.58 |
| AT2G29800.1 | Thale cress | cytosol | 21.49 | 19.57 |
| AT2G29600.1 | Thale cress | nucleus | 21.49 | 19.52 |
| CDX72708 | Canola | plastid | 25.73 | 12.86 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G111200.1 | EnsemblPlantsGene:TraesCS2A01G111200 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24414 | PANTHER:PTHR24414:SF23 | PFAM:PF01344 |
| SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2A:-:62388753..62389886
Molecular Weight (calculated)
40207.9 Da
IEP (calculated)
8.665
GRAVY (calculated)
0.141
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAATASSPQ PPEAIRGTLI PVLPDDLAVQ CIALLPRAAH PTLALVSRAL HALLCLHPEP LLAARRRLRR SDPHIVVSVR PPYSASPRFF LLLPHPGWPP
101: LPLPSPPIPV SSSSAVAVNG HRLYLVGGSV AGIPASSVQI LDTRTRSWSI GPRLSSPREF AAAAVLPGLL FVAGGCVPSS PFWAEALDLA SPCARWSTVP
201: SPDHLREKWM HGCVSLAGKV LAVADRGGLV YHPAAPPGEA WVPVSPVLDM GWKGRAAVVG GILYSYDYMG QVKGYDPDTD AWNTVEGLEK ELPRFLCGAT
301: LANVGGLLYL IWEGKLKGKA SNEKGKVKDM LVIEWATIEV TRAEEGRLSG KVISRDTAVF TDMPRGSAIT HCISLDL
101: LPLPSPPIPV SSSSAVAVNG HRLYLVGGSV AGIPASSVQI LDTRTRSWSI GPRLSSPREF AAAAVLPGLL FVAGGCVPSS PFWAEALDLA SPCARWSTVP
201: SPDHLREKWM HGCVSLAGKV LAVADRGGLV YHPAAPPGEA WVPVSPVLDM GWKGRAAVVG GILYSYDYMG QVKGYDPDTD AWNTVEGLEK ELPRFLCGAT
301: LANVGGLLYL IWEGKLKGKA SNEKGKVKDM LVIEWATIEV TRAEEGRLSG KVISRDTAVF TDMPRGSAIT HCISLDL
001: MAATTSSGDE PPETKSPAQL IPLLSEDVAL SCLARVPRCH YPILSLVSKT FRSLPTSPLL YATRALVGAT ENILYVAIRI PPESGACWFT LLHRTLSNST
101: NSKMLVPIPS CPSPSLVGSA YVVVDSEIYV IGGSIRDVPS SSVWVLDCRF HTWRRVSNMR VGREFAAAGV IDGKIYVIGG CVVDNWARSI NWAEMFDIKT
201: QTWEPVASPG MEVREKWMHA SAVMEGKVYA MADRNGVVYE PKEKKWEMPE KRLDLGWRGR ACVIENILYC YDYLGKIRGY DPKERIWREL KGVESLPKFL
301: CGATMANRGG KLTVLWEGKA GSGGSRRMEI WCAEIDVGRR GEREIWGKIE WSGTVLTVPN ESAIVNCLAA TV
101: NSKMLVPIPS CPSPSLVGSA YVVVDSEIYV IGGSIRDVPS SSVWVLDCRF HTWRRVSNMR VGREFAAAGV IDGKIYVIGG CVVDNWARSI NWAEMFDIKT
201: QTWEPVASPG MEVREKWMHA SAVMEGKVYA MADRNGVVYE PKEKKWEMPE KRLDLGWRGR ACVIENILYC YDYLGKIRGY DPKERIWREL KGVESLPKFL
301: CGATMANRGG KLTVLWEGKA GSGGSRRMEI WCAEIDVGRR GEREIWGKIE WSGTVLTVPN ESAIVNCLAA TV
Arabidopsis Description
SKIP6F-box/kelch-repeat protein SKIP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ04]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.