CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031212.1-P	Field mustard	cytosol	97.7	98.46
CDY59764	Canola	cytosol	87.24	88.14
CDY13796	Canola	cytosol	71.68	73.56
CDY15078	Canola	extracellular	39.54	54.77
CDY15873	Canola	cytosol	19.64	47.24
CDX99573	Canola	cytosol	37.76	45.96
CDX99574	Canola	cytosol	39.54	45.59
AT1G19470.1	Thale cress	cytosol	45.15	42.96
AT1G19460.1	Thale cress	cytosol	44.64	42.07
CDY15875	Canola	cytosol	31.63	40.92
CDY44445	Canola	cytosol	35.46	37.17
CDY69098	Canola	cytosol, plastid	34.95	36.73
KRG89620	Soybean	cytosol	12.5	36.57
CDY56757	Canola	plastid	34.44	35.9
CDY15853	Canola	cytosol	33.67	35.77
VIT_07s0031g01580.t01	Wine grape	plastid	32.65	35.46
CDY46225	Canola	cytosol	33.16	35.23
KRH64149	Soybean	cytosol	29.85	32.59
KRH53797	Soybean	cytosol	29.85	32.32
PGSC0003DMT400042717	Potato	cytosol	28.83	31.65
Solyc04g051870.1.1	Tomato	extracellular	28.83	31.65
TraesCS2A01G111200.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	25.26	26.26
TraesCS2B01G130200.1	Wheat	cytosol, endoplasmic reticulum, plastid	25.0	25.99
GSMUA_Achr2P14860_001	Banana	cytosol, endoplasmic reticulum, plastid	24.49	25.74
EER97716	Sorghum	plastid	22.96	23.81
Zm00001d007152_P001	Maize	plastid	22.45	23.4
Os07t0673700-01	Rice	cytosol	22.19	22.96
HORVU2Hr1G019280.1	Barley	cytosol	20.92	21.64
CDX72708	Canola	plastid	35.71	18.57
TraesCS2D01G111900.1	Wheat	nucleus	20.66	17.8

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	UniProt:A0A078FH84	EnsemblPlants:CDY13795	ProteinID:CDY13795	ProteinID:CDY13795.1
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00078234001
InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PFAM:PF00646	PFAM:PF01344
PANTHER:PTHR24414	PANTHER:PTHR24414:SF23	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI0004EF21AD

Description

BnaA09g42970DBnaA09g42970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FH84]

Coordinates

chrLK032038:-:423325..424503

Molecular Weight (calculated)

43599.6 Da

IEP (calculated)

6.595

GRAVY (calculated)

-0.013

Length

392 amino acids

Sequence
(BLAST)

001: MAVISDIPDG DNGGAPNKKP QEQPGEVETA PSLESLPDVL IDHIIARVPR SNHPEISLTS KLFRRIIASR GLRLTRSLLA ISEHVLYALI AFPPHPLSWH
101: ILYRSNTASL RLRRVTTLPP MPYGPAVVTV GHDIYVIGGY GGTRYLSSVT VVDCRTHTCR SLPSMRVPRY RAAAGVIDGK IYVMGGCENR ISKDWVEAFD
201: LERQIWLGTG GEVSDESGGF VTYDVVKDKI YALGLRQSLH VCEPKDGGVI IIWEGDASEL RGLWQGSSCV VDDLLYTIDP MCWRGHPIIV FDPEEGVEGV
301: WKPVKGVYGL PPCFPWFAYE SKMANVGGKL VILIGNQSWL WNYYGYKYIW CVEIALERRQ GGEIWGRVES VDVVFKTAES SPVIELCRTV IV

Best Arabidopsis Sequence Match ( AT1G19470.1 )
(BLAST)

001: MVNISEIPDD SNDGCDPNKK PEEQVLRRSR RIATRNENQN KKPKEEEEED NRSVSFPIPN ELTEACVALI RKCDYPSLSS VSSYFFNLIA SSGLYETRSR
101: LGLSETFLYA AIKFPDTNPA NWYILHRNKV SSLRLTEVGS LPPVPWGCSV VTVGQEMYVI GGLLDIRRLQ LMTLIDCRTH KCRSLPSMKR GRYKAAAGVV
201: DGKIYVIGGF RMRKPDAEWI EVFDLKTQIW ESLPGPYPRT SAGSQFSAHA VMEDKLYMLG SKFCLVYEPK RNGEWDASVG ATPLKDLWDK TCCVVDDMLY
301: TTDPRRTLGH PIVVYHPKDK TWRPVKGESL WSLPSYFFSK SEMANFGGKL VILGSNKSYV TGDCIGEKGI WCVMIELEKR EGGEIWGKVE SLDCVLGDIN
401: FLSVRLCQTL TI

Arabidopsis Description

Kelch repeat-containing protein At1g19470 [Source:UniProtKB/Swiss-Prot;Acc:P0C2F7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.