Factsheet for Os07t0673700-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97716	Sorghum	plastid	81.79	82.01
Zm00001d007152_P001	Maize	plastid	78.63	79.26
TraesCS2B01G130200.1	Wheat	cytosol, endoplasmic reticulum, plastid	77.57	77.98
TraesCS2A01G111200.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	76.52	76.92
HORVU2Hr1G019280.1	Barley	cytosol	65.7	65.7
GSMUA_Achr2P14860_001	Banana	cytosol, endoplasmic reticulum, plastid	51.19	52.01
TraesCS2D01G111900.1	Wheat	nucleus	60.95	50.77
KRG89620	Soybean	cytosol	15.57	44.03
KRH53797	Soybean	cytosol	39.84	41.71
VIT_07s0031g01580.t01	Wine grape	plastid	39.31	41.27
PGSC0003DMT400042717	Potato	cytosol	37.73	40.06
Solyc04g051870.1.1	Tomato	extracellular	37.73	40.06
KRH64149	Soybean	cytosol	37.73	39.83
CDY46225	Canola	cytosol	38.26	39.3
Bra030269.1-P	Field mustard	cytosol	37.99	39.02
CDY15853	Canola	cytosol	37.73	38.75
AT2G21950.1	Thale cress	cytosol	36.94	37.63
CDY15875	Canola	cytosol	20.58	25.74
Bra030283.1-P	Field mustard	cytosol	18.21	24.13
CDX99574	Canola	cytosol	21.64	24.12
CDY13796	Canola	cytosol	24.27	24.08
Bra030282.1-P	Field mustard	cytosol	20.05	23.53
CDY59764	Canola	cytosol	24.01	23.45
CDY56757	Canola	plastid	23.22	23.4
CDX99573	Canola	cytosol	19.79	23.29
CDY69098	Canola	cytosol, plastid	22.69	23.06
Bra025310.1-P	Field mustard	cytosol, plastid	22.69	23.06
Bra033610.1-P	Field mustard	plastid	22.69	22.87
AT3G27910.1	Thale cress	extracellular, golgi	17.68	22.79
AT2G29860.1	Thale cress	cytosol	14.25	22.5
Bra031212.1-P	Field mustard	cytosol	22.96	22.36
CDY15078	Canola	extracellular	16.62	22.26
CDY13795	Canola	cytosol	22.96	22.19
AT2G29830.1	Thale cress	cytosol	22.43	22.19
AT2G29810.1	Thale cress	cytosol	22.16	21.93
CDY44445	Canola	cytosol	21.64	21.93
AT2G29770.1	Thale cress	cytosol	22.16	21.71
AT1G19460.1	Thale cress	cytosol	23.48	21.39
AT1G19470.1	Thale cress	cytosol	23.22	21.36
AT2G29780.1	Thale cress	cytosol	22.43	21.36
AT4G14905.2	Thale cress	plastid	20.84	21.24
Bra033606.1-P	Field mustard	cytosol	22.16	20.9
AT4G39240.1	Thale cress	cytosol, nucleus, peroxisome	20.58	20.8
AT2G29820.1	Thale cress	cytosol	20.84	20.36
CDY15873	Canola	cytosol	8.71	20.25
AT2G21680.1	Thale cress	cytosol	22.43	19.81
AT2G29600.1	Thale cress	nucleus	20.32	18.55
AT2G29800.1	Thale cress	cytosol	19.26	17.63
CDX72708	Canola	plastid	23.75	11.94

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EntrezGene:4344258	EMBL:AK071934	EMBL:AK107556	ProteinID:BAC16009.1
ProteinID:BAC80132.1	ProteinID:BAF22524.1	ProteinID:BAT03178.1	InterPro:F-box-like_dom_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	EnsemblPlantsGene:Os07g0673700
EnsemblPlants:Os07t0673700-01	PFAM:PF01344	PANTHER:PTHR24414	PANTHER:PTHR24414:SF23	UniProt:Q8H451	SMART:SM00612
SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI00000AD743	RefSeq:XP_015644998.1	SEG:seg	:

Description

F-box protein 400Kelch-type beta propeller domain containing protein. (Os07t0673700-01)

Coordinates

chr7:+:28476421..28479667

Molecular Weight (calculated)

40253.7 Da

IEP (calculated)

8.795

GRAVY (calculated)

0.067

Length

379 amino acids

Sequence
(BLAST)

001: MSTSAPTSSP EPPEFIRGSL IPALPDDLAI HCVALLPRAA HPSLALVSRA FHTLLCRDPG PLLAARRRLR LSDPHVILSL RPPASASPLF FLLLPHPGWP
101: PLPLPSPPVP VSSSSSVAVD GNRVFLFGGS VSGVPSPSVQ ILDPRTRSWS VGPRLSSPRE FAAAVAHSGV LFVAGGCVPS SPFWAESLNL SSPDAKWSPV
201: PSPPHFREKW MHGSASLAGK VLAVADRGGL AYDPAAPPTE AWAPVSPILD MGWKGRAAVV GGILYSYDYL GQVKGYDPDT DCWSKVEGLE QELPKFLCGA
301: TLANVGELLY LVWEGKWKGK GKAKGKGEAR SMVVIDWAAI AVTKAEEGRL TGKVLSRDTI VFKDMPKGSA ITHCIALEL

Best Arabidopsis Sequence Match ( AT2G21950.1 )
(BLAST)

001: MAATTSSGDE PPETKSPAQL IPLLSEDVAL SCLARVPRCH YPILSLVSKT FRSLPTSPLL YATRALVGAT ENILYVAIRI PPESGACWFT LLHRTLSNST
101: NSKMLVPIPS CPSPSLVGSA YVVVDSEIYV IGGSIRDVPS SSVWVLDCRF HTWRRVSNMR VGREFAAAGV IDGKIYVIGG CVVDNWARSI NWAEMFDIKT
201: QTWEPVASPG MEVREKWMHA SAVMEGKVYA MADRNGVVYE PKEKKWEMPE KRLDLGWRGR ACVIENILYC YDYLGKIRGY DPKERIWREL KGVESLPKFL
301: CGATMANRGG KLTVLWEGKA GSGGSRRMEI WCAEIDVGRR GEREIWGKIE WSGTVLTVPN ESAIVNCLAA TV

Arabidopsis Description

SKIP6F-box/kelch-repeat protein SKIP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ04]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.