Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G29810.1 | Thale cress | cytosol | 39.86 | 44.65 |
| AT2G29860.1 | Thale cress | cytosol | 23.54 | 42.08 |
| AT2G29830.1 | Thale cress | cytosol | 36.6 | 40.99 |
| AT2G29770.1 | Thale cress | cytosol | 35.9 | 39.79 |
| AT1G19470.1 | Thale cress | cytosol | 38.0 | 39.56 |
| AT1G19460.1 | Thale cress | cytosol | 38.23 | 39.42 |
| AT2G29780.1 | Thale cress | cytosol | 34.97 | 37.69 |
| AT2G29800.1 | Thale cress | cytosol | 35.2 | 36.47 |
| AT2G29820.1 | Thale cress | cytosol | 32.17 | 35.57 |
| AT2G29600.1 | Thale cress | nucleus | 33.57 | 34.7 |
| AT2G21950.1 | Thale cress | cytosol | 29.84 | 34.41 |
| AT3G27910.1 | Thale cress | extracellular, golgi | 23.08 | 33.67 |
| KRG89620 | Soybean | cytosol | 10.49 | 33.58 |
| AT4G14905.2 | Thale cress | plastid | 28.21 | 32.53 |
| AT4G39240.1 | Thale cress | cytosol, nucleus, peroxisome | 27.97 | 32.0 |
| KRH64149 | Soybean | cytosol | 25.64 | 30.64 |
| PGSC0003DMT400042717 | Potato | cytosol | 24.94 | 29.97 |
| KRH53797 | Soybean | cytosol | 24.94 | 29.56 |
| Solyc04g051870.1.1 | Tomato | extracellular | 24.48 | 29.41 |
| VIT_07s0031g01580.t01 | Wine grape | plastid | 24.24 | 28.81 |
| GSMUA_Achr2P14860_001 | Banana | cytosol, endoplasmic reticulum, plastid | 22.14 | 25.47 |
| TraesCS2B01G130200.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 20.28 | 23.08 |
| Zm00001d007152_P001 | Maize | plastid | 19.81 | 22.61 |
| Os07t0673700-01 | Rice | cytosol | 19.81 | 22.43 |
| TraesCS2A01G111200.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 19.58 | 22.28 |
| EER97716 | Sorghum | plastid | 19.58 | 22.22 |
| HORVU2Hr1G019280.1 | Barley | cytosol | 16.78 | 19.0 |
| TraesCS2D01G111900.1 | Wheat | nucleus | 17.02 | 16.04 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:816706 | ProteinID:AAD23638.1 | ProteinID:AEC07211.1 | ArrayExpress:AT2G21680 |
| EnsemblPlantsGene:AT2G21680 | RefSeq:AT2G21680 | TAIR:AT2G21680 | RefSeq:AT2G21680-TAIR-G | EnsemblPlants:AT2G21680.1 | TAIR:AT2G21680.1 |
| Unigene:At.52857 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | InterPro:IPR015915 |
| InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | RefSeq:NP_179761.4 | PFAM:PF01344 | PANTHER:PTHR24414 | PANTHER:PTHR24414:SF23 |
| UniProt:Q9SIJ3 | SUPFAM:SSF117281 | UniParc:UPI0001A7B00E | SEG:seg | : | : |
Description
Putative F-box/kelch-repeat protein At2g21680 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIJ3]
Coordinates
chr2:+:9267730..9269019
Molecular Weight (calculated)
48784.9 Da
IEP (calculated)
9.131
GRAVY (calculated)
-0.293
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLISETSDD GSTGGDHQIK KPKKEEDRNK KLKEKVQVSL PIPEELILRC FLLVRRCHHP SLSLVCRSFH SLMSKLYDDR LRLGYTENVL YAYVGFPPVE
101: NPSWYILHRK PYRNLPNTIS LKLCKIDSLP PMPWGSTVVT IGSDIYVIGG RVGEKLLEDV GVGYNKPISG GRRGETSIRG GHAGERRISD VTHINCRFHE
201: YRSLPSMKMA RCRAAAGVID GKIYVIGGRK VRTSDWVEVF DLKKQSWSSV PGPYPEAFGR GEFLTYAVMK EKIYCLDLTR NIHIYDPKES KWESWTHGPL
301: SASWNDSSCV VDNLLFCINT SVYFLGWPIK IYDPEKKTWF YLQGLQGFPA NGLFVDGYKM ANFGGKLVIL SADVHRLRRY DCRKREIWCI EIAWERKEDG
401: TFWGKVESVA VVLTPAKTTS VDICGTVTV
101: NPSWYILHRK PYRNLPNTIS LKLCKIDSLP PMPWGSTVVT IGSDIYVIGG RVGEKLLEDV GVGYNKPISG GRRGETSIRG GHAGERRISD VTHINCRFHE
201: YRSLPSMKMA RCRAAAGVID GKIYVIGGRK VRTSDWVEVF DLKKQSWSSV PGPYPEAFGR GEFLTYAVMK EKIYCLDLTR NIHIYDPKES KWESWTHGPL
301: SASWNDSSCV VDNLLFCINT SVYFLGWPIK IYDPEKKTWF YLQGLQGFPA NGLFVDGYKM ANFGGKLVIL SADVHRLRRY DCRKREIWCI EIAWERKEDG
401: TFWGKVESVA VVLTPAKTTS VDICGTVTV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.