Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44445 | Canola | cytosol | 51.02 | 40.11 |
| CDY69098 | Canola | cytosol, plastid | 50.34 | 39.68 |
| Bra025310.1-P | Field mustard | cytosol, plastid | 50.34 | 39.68 |
| KRG89620 | Soybean | cytosol | 15.31 | 33.58 |
| AT4G39240.1 | Thale cress | cytosol, nucleus, peroxisome | 42.52 | 33.33 |
| AT4G14905.2 | Thale cress | plastid | 38.1 | 30.11 |
| AT2G21950.1 | Thale cress | cytosol | 36.73 | 29.03 |
| AT2G29810.1 | Thale cress | cytosol | 34.69 | 26.63 |
| KRH64149 | Soybean | cytosol | 32.31 | 26.46 |
| AT2G29770.1 | Thale cress | cytosol | 34.01 | 25.84 |
| VIT_07s0031g01580.t01 | Wine grape | plastid | 31.63 | 25.76 |
| KRH53797 | Soybean | cytosol | 31.63 | 25.69 |
| AT2G29780.1 | Thale cress | cytosol | 34.69 | 25.63 |
| AT2G29830.1 | Thale cress | cytosol | 33.33 | 25.59 |
| AT2G29600.1 | Thale cress | nucleus | 35.03 | 24.82 |
| AT1G19470.1 | Thale cress | cytosol | 34.35 | 24.51 |
| AT2G29820.1 | Thale cress | cytosol | 31.97 | 24.23 |
| AT2G29800.1 | Thale cress | cytosol | 34.01 | 24.15 |
| AT1G19460.1 | Thale cress | cytosol | 34.01 | 24.04 |
| PGSC0003DMT400042717 | Potato | cytosol | 28.57 | 23.53 |
| Solyc04g051870.1.1 | Tomato | extracellular | 28.23 | 23.25 |
| AT2G21680.1 | Thale cress | cytosol | 33.67 | 23.08 |
| AT2G29860.1 | Thale cress | cytosol | 17.69 | 21.67 |
| GSMUA_Achr2P14860_001 | Banana | cytosol, endoplasmic reticulum, plastid | 25.85 | 20.38 |
| Os07t0673700-01 | Rice | cytosol | 22.79 | 17.68 |
| Zm00001d007152_P001 | Maize | plastid | 22.45 | 17.55 |
| TraesCS2A01G111200.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 22.45 | 17.51 |
| TraesCS2B01G130200.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 22.45 | 17.51 |
| EER97716 | Sorghum | plastid | 22.45 | 17.46 |
| HORVU2Hr1G019280.1 | Barley | cytosol | 22.11 | 17.15 |
| TraesCS2D01G111900.1 | Wheat | nucleus | 20.07 | 12.97 |
Protein Annotations
| ArrayExpress:AT3G27910 | EnsemblPlants:AT3G27910.1 | EnsemblPlantsGene:AT3G27910 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24414 | PANTHER:PTHR24414:SF23 |
| PFAM:PF01344 | RefSeq:AT3G27910 | RefSeq:AT3G27910-TAIR-G | SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 |
| TAIR:AT3G27910 | TAIR:AT3G27910.1 | UniParc:UPI000016358B | MapMan:35.1 | : | : |
Description
Galactose oxidase/kelch repeat superfamily protein [Source:TAIR;Acc:AT3G27910]
Coordinates
chr3:-:10357232..10358281
Molecular Weight (calculated)
33381.0 Da
IEP (calculated)
8.138
GRAVY (calculated)
0.163
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKTLFGILS IKNLTKINLT LVSINWFHCL HARLCLVGDL LLLQLGHKIY VFGGCINGDM TSNVFVIDCL HGTFQFLPSM RVPRGCAAFG IVDGKIYVIG
101: GYNKADSLDN WVEVFDLEKQ TWESFSGLCN EELSKITLKS VVMNKKIYIM DRGNGIVFDP KKGVWERDFL LDRDWVVGSC VIDNMLYTFG FDSVKRIYRV
201: RVYDPSVRVW SFVKGIEDIP KMDGTLGSRM ANHGGKLVIL LNLDKNGGTE LWCIKIALER RGQQGEIWGK ILWYNLVLTL ENSSTIVECF DITI
101: GYNKADSLDN WVEVFDLEKQ TWESFSGLCN EELSKITLKS VVMNKKIYIM DRGNGIVFDP KKGVWERDFL LDRDWVVGSC VIDNMLYTFG FDSVKRIYRV
201: RVYDPSVRVW SFVKGIEDIP KMDGTLGSRM ANHGGKLVIL LNLDKNGGTE LWCIKIALER RGQQGEIWGK ILWYNLVLTL ENSSTIVECF DITI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.