Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 4
- golgi 2
- plasma membrane 2
- endoplasmic reticulum 2
- vacuole 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH53797 | Soybean | cytosol | 88.06 | 32.6 |
| KRH64149 | Soybean | cytosol | 86.57 | 32.31 |
| VIT_07s0031g01580.t01 | Wine grape | plastid | 62.69 | 23.27 |
| PGSC0003DMT400042717 | Potato | cytosol | 59.7 | 22.41 |
| Solyc04g051870.1.1 | Tomato | extracellular | 59.7 | 22.41 |
| AT2G21950.1 | Thale cress | cytosol | 58.21 | 20.97 |
| Bra030269.1-P | Field mustard | cytosol | 55.22 | 20.05 |
| CDY46225 | Canola | cytosol | 55.22 | 20.05 |
| CDY15853 | Canola | cytosol | 55.22 | 20.05 |
| CDY15873 | Canola | cytosol | 23.88 | 19.63 |
| GSMUA_Achr2P14860_001 | Banana | cytosol, endoplasmic reticulum, plastid | 54.48 | 19.57 |
| HORVU2Hr1G019280.1 | Barley | cytosol | 47.76 | 16.89 |
| TraesCS2A01G111200.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 47.01 | 16.71 |
| TraesCS2B01G130200.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 47.01 | 16.71 |
| EER97716 | Sorghum | plastid | 46.27 | 16.4 |
| Zm00001d007152_P001 | Maize | plastid | 45.52 | 16.22 |
| Os07t0673700-01 | Rice | cytosol | 44.03 | 15.57 |
| AT3G27910.1 | Thale cress | extracellular, golgi | 33.58 | 15.31 |
| Bra030282.1-P | Field mustard | cytosol | 35.07 | 14.55 |
| CDX99573 | Canola | cytosol | 34.33 | 14.29 |
| TraesCS2D01G111900.1 | Wheat | nucleus | 47.01 | 13.85 |
| CDY15078 | Canola | extracellular | 29.1 | 13.78 |
| Bra025310.1-P | Field mustard | cytosol, plastid | 35.82 | 12.87 |
| CDY69098 | Canola | cytosol, plastid | 35.82 | 12.87 |
| CDY44445 | Canola | cytosol | 35.82 | 12.83 |
| CDY59764 | Canola | cytosol | 36.57 | 12.63 |
| Bra031212.1-P | Field mustard | cytosol | 36.57 | 12.6 |
| AT4G39240.1 | Thale cress | cytosol, nucleus, peroxisome | 35.07 | 12.53 |
| CDY13795 | Canola | cytosol | 36.57 | 12.5 |
| CDY13796 | Canola | cytosol | 35.07 | 12.3 |
| AT2G29770.1 | Thale cress | cytosol | 34.33 | 11.89 |
| AT2G29810.1 | Thale cress | cytosol | 33.58 | 11.75 |
| Bra033610.1-P | Field mustard | plastid | 32.09 | 11.44 |
| CDY56757 | Canola | plastid | 32.09 | 11.44 |
| AT1G19460.1 | Thale cress | cytosol | 33.58 | 10.82 |
| AT2G21680.1 | Thale cress | cytosol | 33.58 | 10.49 |
| AT4G14905.2 | Thale cress | plastid | 29.1 | 10.48 |
| Bra033606.1-P | Field mustard | cytosol | 31.34 | 10.45 |
| AT1G19470.1 | Thale cress | cytosol | 32.09 | 10.44 |
| AT2G29780.1 | Thale cress | cytosol | 30.6 | 10.3 |
| CDX99574 | Canola | cytosol | 26.12 | 10.29 |
| AT2G29830.1 | Thale cress | cytosol | 29.1 | 10.18 |
| AT2G29600.1 | Thale cress | nucleus | 30.6 | 9.88 |
| AT2G29820.1 | Thale cress | cytosol | 28.36 | 9.79 |
| AT2G29800.1 | Thale cress | cytosol | 27.61 | 8.94 |
| CDY15875 | Canola | cytosol | 18.66 | 8.25 |
| CDX72708 | Canola | plastid | 38.06 | 6.76 |
| AT2G29860.1 | Thale cress | cytosol | 11.19 | 6.25 |
| Bra030283.1-P | Field mustard | cytosol | 11.94 | 5.59 |
Protein Annotations
| EMBL:ACUP02012229 | EnsemblPlants:KRG89620 | EnsemblPlantsGene:GLYMA_20G035100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | PANTHER:PTHR24414 | PANTHER:PTHR24414:SF23 | ProteinID:KRG89620 | ProteinID:KRG89620.1 |
| SUPFAM:SSF117281 | UniParc:UPI000294D1D9 | UniProt:K7N175 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr20:+:4786843..4787704
Molecular Weight (calculated)
14564.8 Da
IEP (calculated)
6.983
GRAVY (calculated)
0.160
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVGCEFAAA GVLHDKIYVF GGCVADTWVE LDQGWKGRAC MVEGILYCYD YLGKIKGFNV GREVWEELKG LEKGLPRFLC GATMTDLGGK LCVCTEIGVK
101: KNSDGELWGQ LGWFGKVLSI PKGSSIVNCS SVSL
101: KNSDGELWGQ LGWFGKVLSI PKGSSIVNCS SVSL
001: MAATTSSGDE PPETKSPAQL IPLLSEDVAL SCLARVPRCH YPILSLVSKT FRSLPTSPLL YATRALVGAT ENILYVAIRI PPESGACWFT LLHRTLSNST
101: NSKMLVPIPS CPSPSLVGSA YVVVDSEIYV IGGSIRDVPS SSVWVLDCRF HTWRRVSNMR VGREFAAAGV IDGKIYVIGG CVVDNWARSI NWAEMFDIKT
201: QTWEPVASPG MEVREKWMHA SAVMEGKVYA MADRNGVVYE PKEKKWEMPE KRLDLGWRGR ACVIENILYC YDYLGKIRGY DPKERIWREL KGVESLPKFL
301: CGATMANRGG KLTVLWEGKA GSGGSRRMEI WCAEIDVGRR GEREIWGKIE WSGTVLTVPN ESAIVNCLAA TV
101: NSKMLVPIPS CPSPSLVGSA YVVVDSEIYV IGGSIRDVPS SSVWVLDCRF HTWRRVSNMR VGREFAAAGV IDGKIYVIGG CVVDNWARSI NWAEMFDIKT
201: QTWEPVASPG MEVREKWMHA SAVMEGKVYA MADRNGVVYE PKEKKWEMPE KRLDLGWRGR ACVIENILYC YDYLGKIRGY DPKERIWREL KGVESLPKFL
301: CGATMANRGG KLTVLWEGKA GSGGSRRMEI WCAEIDVGRR GEREIWGKIE WSGTVLTVPN ESAIVNCLAA TV
Arabidopsis Description
SKIP6F-box/kelch-repeat protein SKIP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ04]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.