Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG89620 | Soybean | cytosol | 32.6 | 88.06 |
| KRH64149 | Soybean | cytosol | 83.98 | 84.68 |
| VIT_07s0031g01580.t01 | Wine grape | plastid | 60.77 | 60.94 |
| Solyc04g051870.1.1 | Tomato | extracellular | 55.8 | 56.58 |
| PGSC0003DMT400042717 | Potato | cytosol | 55.52 | 56.3 |
| AT2G21950.1 | Thale cress | cytosol | 56.91 | 55.38 |
| CDY46225 | Canola | cytosol | 55.25 | 54.2 |
| CDY15853 | Canola | cytosol | 55.25 | 54.2 |
| Bra030269.1-P | Field mustard | cytosol | 54.97 | 53.93 |
| GSMUA_Achr2P14860_001 | Banana | cytosol, endoplasmic reticulum, plastid | 48.07 | 46.65 |
| EER97716 | Sorghum | plastid | 41.71 | 39.95 |
| Os07t0673700-01 | Rice | cytosol | 41.71 | 39.84 |
| Zm00001d007152_P001 | Maize | plastid | 41.16 | 39.63 |
| TraesCS2B01G130200.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 40.88 | 39.26 |
| TraesCS2A01G111200.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 40.33 | 38.73 |
| HORVU2Hr1G019280.1 | Barley | cytosol | 35.08 | 33.51 |
| CDY44445 | Canola | cytosol | 32.87 | 31.82 |
| AT3G27910.1 | Thale cress | extracellular, golgi | 25.69 | 31.63 |
| CDY69098 | Canola | cytosol, plastid | 32.32 | 31.37 |
| Bra025310.1-P | Field mustard | cytosol, plastid | 32.32 | 31.37 |
| CDX99573 | Canola | cytosol | 27.35 | 30.75 |
| CDY15078 | Canola | extracellular | 24.03 | 30.74 |
| Bra030282.1-P | Field mustard | cytosol | 27.07 | 30.34 |
| CDY59764 | Canola | cytosol | 32.32 | 30.15 |
| Bra031212.1-P | Field mustard | cytosol | 32.32 | 30.08 |
| CDY15875 | Canola | cytosol | 25.14 | 30.03 |
| AT2G29810.1 | Thale cress | cytosol | 31.77 | 30.03 |
| CDY13795 | Canola | cytosol | 32.32 | 29.85 |
| Bra033610.1-P | Field mustard | plastid | 30.94 | 29.79 |
| AT2G29860.1 | Thale cress | cytosol | 19.61 | 29.58 |
| CDY13796 | Canola | cytosol | 31.22 | 29.58 |
| CDY56757 | Canola | plastid | 30.39 | 29.26 |
| AT4G39240.1 | Thale cress | cytosol, nucleus, peroxisome | 30.11 | 29.07 |
| AT2G29830.1 | Thale cress | cytosol | 29.83 | 28.2 |
| AT2G29770.1 | Thale cress | cytosol | 30.11 | 28.17 |
| CDX99574 | Canola | cytosol | 26.24 | 27.94 |
| Bra033606.1-P | Field mustard | cytosol | 30.94 | 27.86 |
| AT4G14905.2 | Thale cress | plastid | 28.18 | 27.42 |
| Bra030283.1-P | Field mustard | cytosol | 21.27 | 26.92 |
| AT2G29780.1 | Thale cress | cytosol | 29.56 | 26.88 |
| AT2G29820.1 | Thale cress | cytosol | 28.73 | 26.8 |
| TraesCS2D01G111900.1 | Wheat | nucleus | 33.43 | 26.59 |
| AT1G19470.1 | Thale cress | cytosol | 28.73 | 25.24 |
| CDY15873 | Canola | cytosol | 11.33 | 25.15 |
| AT2G21680.1 | Thale cress | cytosol | 29.56 | 24.94 |
| AT1G19460.1 | Thale cress | cytosol | 28.45 | 24.76 |
| AT2G29600.1 | Thale cress | nucleus | 27.9 | 24.34 |
| AT2G29800.1 | Thale cress | cytosol | 27.07 | 23.67 |
| CDX72708 | Canola | plastid | 33.15 | 15.92 |
Protein Annotations
| EntrezGene:100795539 | Gene3D:2.120.10.80 | MapMan:35.1 | EMBL:ACUP02003486 | InterPro:F-box-like_dom_sf | EnsemblPlantsGene:GLYMA_06G146500 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | UniProt:I1KBB7 | InterPro:IPR015915 | EnsemblPlants:KRH53797 |
| ProteinID:KRH53797 | ProteinID:KRH53797.1 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF01344 | PANTHER:PTHR24414 |
| PANTHER:PTHR24414:SF23 | SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI000233A161 | SEG:seg |
Description
hypothetical protein
Coordinates
chr6:+:11950515..11951952
Molecular Weight (calculated)
39552.5 Da
IEP (calculated)
7.092
GRAVY (calculated)
-0.028
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWSSGSESE ESASPNNLIP SLPDDVALNC LGRIPRSQHP TLSLVSKPIR TLLSSPILFT TRTLLQCTQP LLYLTLRSRH SSLLQFFTLH RTNPNNPLLA
101: PLPPIPSPAV GSAYAVLGPT IYVLGGSIHD VPSPNVWLLD CRFNRWLRGP SMRVGREFAA AGVLHGKIYV LGGCVADTWS RSANWAEVLD PATGQWERVA
201: SPTEVREKWM HASAVVGERI YAMADRGGIA YEPSSGAWES VGVELDHGWR GRACVVEGIL YCYDYLGKIK GFDVGRGVWE ELKGLEKGLP RFLCGATMAD
301: LGGKLCVVWE CQGNENEMEI WCAEIGVKKN SDGELWGQLV WFGKVLSVPK GSSIVNCSSV SL
101: PLPPIPSPAV GSAYAVLGPT IYVLGGSIHD VPSPNVWLLD CRFNRWLRGP SMRVGREFAA AGVLHGKIYV LGGCVADTWS RSANWAEVLD PATGQWERVA
201: SPTEVREKWM HASAVVGERI YAMADRGGIA YEPSSGAWES VGVELDHGWR GRACVVEGIL YCYDYLGKIK GFDVGRGVWE ELKGLEKGLP RFLCGATMAD
301: LGGKLCVVWE CQGNENEMEI WCAEIGVKKN SDGELWGQLV WFGKVLSVPK GSSIVNCSSV SL
001: MAATTSSGDE PPETKSPAQL IPLLSEDVAL SCLARVPRCH YPILSLVSKT FRSLPTSPLL YATRALVGAT ENILYVAIRI PPESGACWFT LLHRTLSNST
101: NSKMLVPIPS CPSPSLVGSA YVVVDSEIYV IGGSIRDVPS SSVWVLDCRF HTWRRVSNMR VGREFAAAGV IDGKIYVIGG CVVDNWARSI NWAEMFDIKT
201: QTWEPVASPG MEVREKWMHA SAVMEGKVYA MADRNGVVYE PKEKKWEMPE KRLDLGWRGR ACVIENILYC YDYLGKIRGY DPKERIWREL KGVESLPKFL
301: CGATMANRGG KLTVLWEGKA GSGGSRRMEI WCAEIDVGRR GEREIWGKIE WSGTVLTVPN ESAIVNCLAA TV
101: NSKMLVPIPS CPSPSLVGSA YVVVDSEIYV IGGSIRDVPS SSVWVLDCRF HTWRRVSNMR VGREFAAAGV IDGKIYVIGG CVVDNWARSI NWAEMFDIKT
201: QTWEPVASPG MEVREKWMHA SAVMEGKVYA MADRNGVVYE PKEKKWEMPE KRLDLGWRGR ACVIENILYC YDYLGKIRGY DPKERIWREL KGVESLPKFL
301: CGATMANRGG KLTVLWEGKA GSGGSRRMEI WCAEIDVGRR GEREIWGKIE WSGTVLTVPN ESAIVNCLAA TV
Arabidopsis Description
SKIP6F-box/kelch-repeat protein SKIP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ04]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.