CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13795	Canola	cytosol	88.14	87.24
CDY13796	Canola	cytosol	75.52	76.7
CDY15078	Canola	extracellular	41.49	56.89
CDX99573	Canola	cytosol	39.43	47.52
CDY15873	Canola	cytosol	19.59	46.63
CDX99574	Canola	cytosol	39.69	45.29
AT1G19460.1	Thale cress	cytosol	45.36	42.31
AT1G19470.1	Thale cress	cytosol	44.59	41.99
CDY15875	Canola	cytosol	32.47	41.58
CDY44445	Canola	cytosol	37.63	39.04
CDY69098	Canola	cytosol, plastid	36.6	38.07
KRG89620	Soybean	cytosol	12.63	36.57
CDY56757	Canola	plastid	34.79	35.9
CDY46225	Canola	cytosol	33.76	35.5
CDY15853	Canola	cytosol	33.76	35.5
VIT_07s0031g01580.t01	Wine grape	plastid	32.99	35.46
KRH64149	Soybean	cytosol	30.41	32.87
KRH53797	Soybean	cytosol	30.15	32.32
PGSC0003DMT400042717	Potato	cytosol	28.35	30.81
Solyc04g051870.1.1	Tomato	extracellular	28.35	30.81
GSMUA_Achr2P14860_001	Banana	cytosol, endoplasmic reticulum, plastid	25.26	26.27
TraesCS2A01G111200.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	25.52	26.26
TraesCS2B01G130200.1	Wheat	cytosol, endoplasmic reticulum, plastid	25.26	25.99
Zm00001d007152_P001	Maize	plastid	23.71	24.47
EER97716	Sorghum	plastid	23.71	24.34
Os07t0673700-01	Rice	cytosol	23.45	24.01
HORVU2Hr1G019280.1	Barley	cytosol	20.88	21.37
CDX72708	Canola	plastid	36.08	18.57
TraesCS2D01G111900.1	Wheat	nucleus	19.85	16.92

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	UniProt:A0A078J831	EnsemblPlants:CDY59764	ProteinID:CDY59764	ProteinID:CDY59764.1
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00027666001
InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PFAM:PF00646	PFAM:PF01344
PANTHER:PTHR24414	PANTHER:PTHR24414:SF23	SMART:SM00256	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383
UniParc:UPI0004EEC043	:	:	:	:	:

Description

BnaC08g49370DBnaC08g49370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J831]

Coordinates

chrLK033803:+:44394..45560

Molecular Weight (calculated)

43264.2 Da

IEP (calculated)

6.421

GRAVY (calculated)

-0.018

Length

388 amino acids

Sequence
(BLAST)

001: MAVISDIPDG DNGGAPNKKP QEQPEEVTSL ESLPDVLIEH IIARVPRCNH PEISLVSKLF RRIIASPGLR LTRSNLAISE HVLYALLAFP PHPPSWHILY
101: RSNASLRLRR VTTLPLMPYG SAVVTIGHDI YVIGGSDGTR YLSNVTVVDC RTHTCRSLPS MRVARFRAAA GVIDGKIYVM GGCENRISKD WVESFDLERQ
201: IWLGTGAEVS DESGGFVTYD VVKDKIYVLG RRQSLNVCEP KEGRIIIWEG AASELTGLWQ GSSCVVDDLL YTIDPMCWRG HPIIVFDPEE GVVEGVWKPV
301: KGVYGLPPCF HWYAYESRMA NVGGKLVILV GNQSQLWNIY GDKYIWCVEI ALERRQGGEI WGRVESVDVV FKTTESSPII ELCRTVIV

Best Arabidopsis Sequence Match ( AT2G29810.1 )
(BLAST)

001: MAVISETSDE GSNGGAANKK PQEEEENIPP IPKELPEELI VIIVALVRRY HYPKLSLISK AYRDLISSPE LFQTRSRLGF TEPVLYTSIG FPPFDLPSWY
101: ILHRISLQFK QITSLPSMLP GSAVVTIDYK MYVLGGFIGL NQPVSTMIVI DCRFHTYREL PSMQRDRGGA AAGVIDGKIY VIGGCKKRYN DWVEVFDVEN
201: ESWETVPGPY PNVASESVEF SQYAVMEQKI YILDPLFCLT YEPRKRRFEA WGRRSQQRRY ESCCVVNDML CTVDSTCSHG YPIVVYDPKG MVWRPVKGVQ
301: SSDLPNLVYY ESRMANFGGK LVILGGNQSR DRKDSYLEKD IWCIEIALEK REDGDIWGHV ESRSVVLSSS KWPLIALSRS VTV

Arabidopsis Description

Putative F-box/kelch-repeat protein At2g29810 [Source:UniProtKB/Swiss-Prot;Acc:O82375]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.