CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1
extracellular 2
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15873	Canola	cytosol	26.15	45.4
CDY59764	Canola	cytosol	56.89	41.49
CDY13795	Canola	cytosol	54.77	39.54
CDX99573	Canola	cytosol	44.17	38.82
CDY13796	Canola	cytosol	51.94	38.48
KRG89620	Soybean	cytosol	13.78	29.1
CDX99574	Canola	cytosol	33.92	28.24
CDY15875	Canola	cytosol	29.33	27.39
AT1G19470.1	Thale cress	cytosol	38.52	26.46
AT1G19460.1	Thale cress	cytosol	38.87	26.44
CDY69098	Canola	cytosol, plastid	32.51	24.66
VIT_07s0031g01580.t01	Wine grape	plastid	30.74	24.1
KRH53797	Soybean	cytosol	30.74	24.03
CDY44445	Canola	cytosol	31.45	23.8
KRH64149	Soybean	cytosol	30.04	23.68
CDY15853	Canola	cytosol	30.04	23.04
CDY46225	Canola	cytosol	29.33	22.49
CDY56757	Canola	plastid	28.62	21.54
PGSC0003DMT400042717	Potato	cytosol	25.44	20.17
Solyc04g051870.1.1	Tomato	extracellular	25.44	20.17
GSMUA_Achr2P14860_001	Banana	cytosol, endoplasmic reticulum, plastid	23.32	17.69
Zm00001d007152_P001	Maize	plastid	23.32	17.55
TraesCS2B01G130200.1	Wheat	cytosol, endoplasmic reticulum, plastid	23.32	17.51
EER97716	Sorghum	plastid	23.32	17.46
TraesCS2A01G111200.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	22.97	17.24
Os07t0673700-01	Rice	cytosol	22.26	16.62
HORVU2Hr1G019280.1	Barley	cytosol	21.91	16.36
TraesCS2D01G111900.1	Wheat	nucleus	19.79	12.31
CDX72708	Canola	plastid	28.62	10.74

Protein Annotations

EnsemblPlants:CDY15078	EnsemblPlantsGene:GSBRNA2T00085215001	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	PANTHER:PTHR24414	PANTHER:PTHR24414:SF23	ProteinID:CDY15078	ProteinID:CDY15078.1
SUPFAM:SSF117281	UniParc:UPI0004EE2428	UniProt:A0A078FS32	MapMan:35.1	:	:

Description

BnaC03g44390DBnaC03g44390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FS32]

Coordinates

chrLK032051:+:378395..380423

Molecular Weight (calculated)

32699.7 Da

IEP (calculated)

9.746

GRAVY (calculated)

-0.164

Length

283 amino acids

Sequence
(BLAST)

001: MGHVPHPTLL WLSAPERFLY ALLGFPPHEL PRWHILYRTN NDASLRLRRV DSLPPVPYGC AVVAIGREIY TFGIDRKIFV MGGCETPSAD WVEAFDLERR
101: VWLRWTWPMA SNVRIDFVTY AVVKQRIYTL SPRAWCHAYD PRERTLETWA GGHELRGFWQ ASSCVVDGML FNVDPGRFLG HLILVFDLKK QVWRPVKLKG
201: AHGLPPCVYH YGYQSRMGNI GGKLVILVGN QTKWWNYEGE KSIWCVERRR QGGEIRGKVE SVDVVFKTTK STPTIELFRT VIV

Best Arabidopsis Sequence Match ( AT1G19460.1 )
(BLAST)

001: MANISEISGD SNDGGDPNKK PEEQVLRRSR RIATRNENQN KKPKEEEEKD NRSVSFPIPN ELTEACVALI RKCDYPSLSS VSSYFFNLIA SSELYETRSR
101: LGLSETFLYA AIRFPDTNPP NWYILHRNKV SSLRLSKLES LPPVPYGCSV VTIGQEMYVI GGLLDVRRLQ LMTLIDCRTH KCRSLPKMKR GRYHAAAGVF
201: DGKIYVIGGF RMRKPDAEWI EVFDLKKQIW ESLPGPYPKT SMDSQFFAHA VMEDKLYILG SRCLIYEPKR NGEWDATVNA NPIWNLWKVP CTMQCVIDDM
301: LYTIDPQCTL GHPIVVYNPK DKTWRPVKGE SLRTLPSYFV SDGSEMANFG GKLVILGSNG SCYDTGDCIG EKGIWCVMIE LEKREGGEIW GKVESLDCVL
401: GDINFLSVWL CQTLTL

Arabidopsis Description

Kelch repeat-containing protein At1g19460 [Source:UniProtKB/Swiss-Prot;Acc:Q3ED93]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.