Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G19460.1 | Thale cress | cytosol | 84.95 | 84.13 |
| AT2G29810.1 | Thale cress | cytosol | 43.2 | 46.48 |
| Bra031212.1-P | Field mustard | cytosol | 43.2 | 45.76 |
| CDY13795 | Canola | cytosol | 42.96 | 45.15 |
| CDY59764 | Canola | cytosol | 41.99 | 44.59 |
| AT2G29770.1 | Thale cress | cytosol | 41.75 | 44.44 |
| CDY13796 | Canola | cytosol | 40.53 | 43.72 |
| AT2G29860.1 | Thale cress | cytosol | 24.03 | 41.25 |
| AT2G29780.1 | Thale cress | cytosol | 39.81 | 41.21 |
| AT2G29830.1 | Thale cress | cytosol | 37.86 | 40.73 |
| AT2G29820.1 | Thale cress | cytosol | 38.35 | 40.72 |
| AT2G29800.1 | Thale cress | cytosol | 40.29 | 40.1 |
| AT2G29600.1 | Thale cress | nucleus | 38.84 | 38.55 |
| CDY15078 | Canola | extracellular | 26.46 | 38.52 |
| AT2G21680.1 | Thale cress | cytosol | 39.56 | 38.0 |
| AT2G21950.1 | Thale cress | cytosol | 31.07 | 34.41 |
| AT3G27910.1 | Thale cress | extracellular, golgi | 24.51 | 34.35 |
| AT4G39240.1 | Thale cress | cytosol, nucleus, peroxisome | 30.34 | 33.33 |
| KRG89620 | Soybean | cytosol | 10.44 | 32.09 |
| AT4G14905.2 | Thale cress | plastid | 27.91 | 30.91 |
| PGSC0003DMT400042717 | Potato | cytosol | 26.21 | 30.25 |
| Solyc04g051870.1.1 | Tomato | extracellular | 25.73 | 29.69 |
| KRH64149 | Soybean | cytosol | 25.49 | 29.25 |
| KRH53797 | Soybean | cytosol | 25.24 | 28.73 |
| VIT_07s0031g01580.t01 | Wine grape | plastid | 24.27 | 27.7 |
| GSMUA_Achr2P14860_001 | Banana | cytosol, endoplasmic reticulum, plastid | 21.12 | 23.32 |
| Os07t0673700-01 | Rice | cytosol | 21.36 | 23.22 |
| TraesCS2B01G130200.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 21.12 | 23.08 |
| Zm00001d007152_P001 | Maize | plastid | 20.63 | 22.61 |
| TraesCS2A01G111200.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 20.63 | 22.55 |
| EER97716 | Sorghum | plastid | 20.63 | 22.49 |
| HORVU2Hr1G019280.1 | Barley | cytosol | 17.72 | 19.26 |
| TraesCS2D01G111900.1 | Wheat | nucleus | 17.48 | 15.82 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:838531 | ProteinID:AAF79430.1 | ProteinID:AEE29855.1 | ArrayExpress:AT1G19470 |
| EnsemblPlantsGene:AT1G19470 | RefSeq:AT1G19470 | TAIR:AT1G19470 | RefSeq:AT1G19470-TAIR-G | EnsemblPlants:AT1G19470.1 | TAIR:AT1G19470.1 |
| Unigene:At.51681 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller |
| InterPro:Kelch_1 | RefSeq:NP_173379.1 | UniProt:P0C2F7 | PFAM:PF01344 | PO:PO:0025195 | PANTHER:PTHR24414 |
| PANTHER:PTHR24414:SF23 | SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI0000162E11 | SEG:seg | : |
Description
Kelch repeat-containing protein At1g19470 [Source:UniProtKB/Swiss-Prot;Acc:P0C2F7]
Coordinates
chr1:+:6741296..6742534
Molecular Weight (calculated)
46543.0 Da
IEP (calculated)
7.770
GRAVY (calculated)
-0.323
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNISEIPDD SNDGCDPNKK PEEQVLRRSR RIATRNENQN KKPKEEEEED NRSVSFPIPN ELTEACVALI RKCDYPSLSS VSSYFFNLIA SSGLYETRSR
101: LGLSETFLYA AIKFPDTNPA NWYILHRNKV SSLRLTEVGS LPPVPWGCSV VTVGQEMYVI GGLLDIRRLQ LMTLIDCRTH KCRSLPSMKR GRYKAAAGVV
201: DGKIYVIGGF RMRKPDAEWI EVFDLKTQIW ESLPGPYPRT SAGSQFSAHA VMEDKLYMLG SKFCLVYEPK RNGEWDASVG ATPLKDLWDK TCCVVDDMLY
301: TTDPRRTLGH PIVVYHPKDK TWRPVKGESL WSLPSYFFSK SEMANFGGKL VILGSNKSYV TGDCIGEKGI WCVMIELEKR EGGEIWGKVE SLDCVLGDIN
401: FLSVRLCQTL TI
101: LGLSETFLYA AIKFPDTNPA NWYILHRNKV SSLRLTEVGS LPPVPWGCSV VTVGQEMYVI GGLLDIRRLQ LMTLIDCRTH KCRSLPSMKR GRYKAAAGVV
201: DGKIYVIGGF RMRKPDAEWI EVFDLKTQIW ESLPGPYPRT SAGSQFSAHA VMEDKLYMLG SKFCLVYEPK RNGEWDASVG ATPLKDLWDK TCCVVDDMLY
301: TTDPRRTLGH PIVVYHPKDK TWRPVKGESL WSLPSYFFSK SEMANFGGKL VILGSNKSYV TGDCIGEKGI WCVMIELEKR EGGEIWGKVE SLDCVLGDIN
401: FLSVRLCQTL TI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.