Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G29860.1 | Thale cress | cytosol | 40.99 | 65.42 |
| AT2G29820.1 | Thale cress | cytosol | 61.36 | 60.57 |
| AT2G29810.1 | Thale cress | cytosol | 51.44 | 51.44 |
| CDX99573 | Canola | cytosol | 39.16 | 46.58 |
| AT2G29770.1 | Thale cress | cytosol | 45.17 | 44.7 |
| Bra030282.1-P | Field mustard | cytosol | 37.6 | 44.58 |
| CDY15875 | Canola | cytosol | 34.73 | 43.89 |
| AT2G29780.1 | Thale cress | cytosol | 45.17 | 43.47 |
| CDY15873 | Canola | cytosol | 17.75 | 41.72 |
| AT2G29800.1 | Thale cress | cytosol | 44.65 | 41.3 |
| AT2G29600.1 | Thale cress | nucleus | 43.86 | 40.48 |
| CDX99574 | Canola | cytosol | 35.77 | 40.29 |
| Bra030283.1-P | Field mustard | cytosol | 29.77 | 39.86 |
| AT1G19470.1 | Thale cress | cytosol | 40.73 | 37.86 |
| AT1G19460.1 | Thale cress | cytosol | 40.99 | 37.74 |
| AT2G21680.1 | Thale cress | cytosol | 40.99 | 36.6 |
| AT2G21950.1 | Thale cress | cytosol | 32.9 | 33.87 |
| AT4G39240.1 | Thale cress | cytosol, nucleus, peroxisome | 33.16 | 33.87 |
| AT3G27910.1 | Thale cress | extracellular, golgi | 25.59 | 33.33 |
| AT4G14905.2 | Thale cress | plastid | 31.59 | 32.53 |
| KRH64149 | Soybean | cytosol | 28.72 | 30.64 |
| KRH53797 | Soybean | cytosol | 28.2 | 29.83 |
| PGSC0003DMT400042717 | Potato | cytosol | 27.15 | 29.13 |
| Solyc04g051870.1.1 | Tomato | extracellular | 27.15 | 29.13 |
| KRG89620 | Soybean | cytosol | 10.18 | 29.1 |
| VIT_07s0031g01580.t01 | Wine grape | plastid | 25.59 | 27.15 |
| GSMUA_Achr2P14860_001 | Banana | cytosol, endoplasmic reticulum, plastid | 25.59 | 26.27 |
| Zm00001d007152_P001 | Maize | plastid | 22.72 | 23.14 |
| TraesCS2A01G111200.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 22.45 | 22.81 |
| TraesCS2B01G130200.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 22.45 | 22.81 |
| EER97716 | Sorghum | plastid | 22.19 | 22.49 |
| Os07t0673700-01 | Rice | cytosol | 22.19 | 22.43 |
| HORVU2Hr1G019280.1 | Barley | cytosol | 18.02 | 18.21 |
| TraesCS2D01G111900.1 | Wheat | nucleus | 18.28 | 15.38 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:817533 | ProteinID:AAC35218.1 | ProteinID:AEC08309.1 | ArrayExpress:AT2G29830 |
| EnsemblPlantsGene:AT2G29830 | RefSeq:AT2G29830 | TAIR:AT2G29830 | RefSeq:AT2G29830-TAIR-G | EnsemblPlants:AT2G29830.1 | TAIR:AT2G29830.1 |
| EMBL:AY464611 | Unigene:At.49284 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | RefSeq:NP_180544.1 |
| UniProt:O82373 | PFAM:PF00646 | PFAM:PF01344 | PFscan:PS50181 | PANTHER:PTHR24414 | PANTHER:PTHR24414:SF23 |
| SMART:SM00256 | SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI00000AA030 | SEG:seg |
Description
F-box/kelch-repeat protein At2g29830 [Source:UniProtKB/Swiss-Prot;Acc:O82373]
Coordinates
chr2:-:12730411..12731599
Molecular Weight (calculated)
43285.0 Da
IEP (calculated)
4.589
GRAVY (calculated)
0.062
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVLSEIPGD PNEDNQNENP QEEVENLPIL LQLPEELIAS IVALIPRCHY PSLSLVSRAF RHLITSQELY VARSNLGFTE PVLYALIGFQ AYTRPSWFFL
101: RRSNFPLQLH RIRSLPPMLS GAAVVTIDYK MYVMGGCIGY NHPASSNVIV IDCRFHTWKY LPDMKRARCR AATGIIDGRI YVIGGCKKQD ADWVEVFDVT
201: TQSWETVPSE CPNDANENGE FITYVVMQGR LFILDLECCF SYEPVQGLWE SWDDGSELMR FWHSSSSCVV GDLLYALDLT CALEHPIVVY YPNELVWRPV
301: MGVDTAHLPI LTEYTSTLAN FDGKLVILGG GDCSESSSEI WCVEIALETR QGDQIWGVVK SVSIVSRDLP MRHVIELCRT VMV
101: RRSNFPLQLH RIRSLPPMLS GAAVVTIDYK MYVMGGCIGY NHPASSNVIV IDCRFHTWKY LPDMKRARCR AATGIIDGRI YVIGGCKKQD ADWVEVFDVT
201: TQSWETVPSE CPNDANENGE FITYVVMQGR LFILDLECCF SYEPVQGLWE SWDDGSELMR FWHSSSSCVV GDLLYALDLT CALEHPIVVY YPNELVWRPV
301: MGVDTAHLPI LTEYTSTLAN FDGKLVILGG GDCSESSSEI WCVEIALETR QGDQIWGVVK SVSIVSRDLP MRHVIELCRT VMV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.