Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra030283.1-P | Field mustard | cytosol | 65.68 | 69.58 |
CDX99574 | Canola | cytosol | 69.97 | 62.35 |
CDX99573 | Canola | cytosol | 57.76 | 54.35 |
CDY15873 | Canola | cytosol | 22.77 | 42.33 |
AT2G29860.1 | Thale cress | cytosol | 30.36 | 38.33 |
AT2G29810.1 | Thale cress | cytosol | 46.2 | 36.55 |
AT2G29830.1 | Thale cress | cytosol | 43.89 | 34.73 |
CDY59764 | Canola | cytosol | 41.58 | 32.47 |
CDY13796 | Canola | cytosol | 40.92 | 32.46 |
AT2G29780.1 | Thale cress | cytosol | 42.24 | 32.16 |
CDY13795 | Canola | cytosol | 40.92 | 31.63 |
AT2G29770.1 | Thale cress | cytosol | 38.94 | 30.49 |
AT2G29820.1 | Thale cress | cytosol | 38.61 | 30.15 |
CDY15078 | Canola | extracellular | 27.39 | 29.33 |
CDY46225 | Canola | cytosol | 34.98 | 28.73 |
CDY15853 | Canola | cytosol | 34.32 | 28.18 |
CDY69098 | Canola | cytosol, plastid | 34.65 | 28.15 |
KRH64149 | Soybean | cytosol | 33.33 | 28.13 |
CDY44445 | Canola | cytosol | 34.32 | 27.81 |
AT2G29600.1 | Thale cress | nucleus | 36.96 | 26.99 |
PGSC0003DMT400042717 | Potato | cytosol | 31.68 | 26.89 |
CDY56757 | Canola | plastid | 33.33 | 26.86 |
Solyc04g051870.1.1 | Tomato | extracellular | 31.35 | 26.61 |
AT2G29800.1 | Thale cress | cytosol | 35.97 | 26.33 |
VIT_07s0031g01580.t01 | Wine grape | plastid | 30.36 | 25.48 |
KRH53797 | Soybean | cytosol | 30.03 | 25.14 |
GSMUA_Achr2P14860_001 | Banana | cytosol, endoplasmic reticulum, plastid | 29.37 | 23.86 |
TraesCS2B01G130200.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 27.06 | 21.75 |
Zm00001d007152_P001 | Maize | plastid | 26.73 | 21.54 |
EER97716 | Sorghum | plastid | 26.73 | 21.43 |
TraesCS2A01G111200.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 26.4 | 21.22 |
Os07t0673700-01 | Rice | cytosol | 25.74 | 20.58 |
KRG89620 | Soybean | cytosol | 8.25 | 18.66 |
HORVU2Hr1G019280.1 | Barley | cytosol | 21.12 | 16.89 |
CDX72708 | Canola | plastid | 31.35 | 12.6 |
TraesCS2D01G111900.1 | Wheat | nucleus | 17.82 | 11.87 |
Protein Annotations
Gene3D:2.120.10.80 | MapMan:35.1 | UniProt:A0A078FN52 | EnsemblPlants:CDY15875 | ProteinID:CDY15875 | ProteinID:CDY15875.1 |
InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00090233001 |
InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF00646 | PFAM:PF01344 |
PANTHER:PTHR24414 | PANTHER:PTHR24414:SF23 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI0004EED184 | SEG:seg |
Description
BnaA04g12360DBnaA04g12360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FN52]
Coordinates
chrLK032059:-:226466..227577
Molecular Weight (calculated)
33927.8 Da
IEP (calculated)
9.103
GRAVY (calculated)
-0.207
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQKQEEEEE VKKSFAHLPY DVTEHCLAIA PRRHYPNLSL ASKSFRRILR SPELYQRRST LGVTEPVLYA SVGFPPSQTP SWHTLHRNHF SLRLLKIASL
101: PSRLLSAVAT VGTEMYVLGG SVGGNPTSDV NLIDCRFHTS QTLPRMKRAL SRAVAGAIDG KVYVIGGCRK KSDDWVEVFD VKTQAWRDMP AVLPRAHWEG
201: QFSHSFLGPP LAVMDGKIFV LDPSATCLVF DPSVGALVEW DDGGELMSLW QASSCVVDDK LYTIDTGRSL KYPIVVYDPK AKVKRWKPVY GVNLRRDLLP
301: FDS
101: PSRLLSAVAT VGTEMYVLGG SVGGNPTSDV NLIDCRFHTS QTLPRMKRAL SRAVAGAIDG KVYVIGGCRK KSDDWVEVFD VKTQAWRDMP AVLPRAHWEG
201: QFSHSFLGPP LAVMDGKIFV LDPSATCLVF DPSVGALVEW DDGGELMSLW QASSCVVDDK LYTIDTGRSL KYPIVVYDPK AKVKRWKPVY GVNLRRDLLP
301: FDS
001: MVVLSEIPGD PNEDNQNENP QEEVENLPIL LQLPEELIAS IVALIPRCHY PSLSLVSRAF RHLITSQELY VARSNLGFTE PVLYALIGFQ AYTRPSWFFL
101: RRSNFPLQLH RIRSLPPMLS GAAVVTIDYK MYVMGGCIGY NHPASSNVIV IDCRFHTWKY LPDMKRARCR AATGIIDGRI YVIGGCKKQD ADWVEVFDVT
201: TQSWETVPSE CPNDANENGE FITYVVMQGR LFILDLECCF SYEPVQGLWE SWDDGSELMR FWHSSSSCVV GDLLYALDLT CALEHPIVVY YPNELVWRPV
301: MGVDTAHLPI LTEYTSTLAN FDGKLVILGG GDCSESSSEI WCVEIALETR QGDQIWGVVK SVSIVSRDLP MRHVIELCRT VMV
101: RRSNFPLQLH RIRSLPPMLS GAAVVTIDYK MYVMGGCIGY NHPASSNVIV IDCRFHTWKY LPDMKRARCR AATGIIDGRI YVIGGCKKQD ADWVEVFDVT
201: TQSWETVPSE CPNDANENGE FITYVVMQGR LFILDLECCF SYEPVQGLWE SWDDGSELMR FWHSSSSCVV GDLLYALDLT CALEHPIVVY YPNELVWRPV
301: MGVDTAHLPI LTEYTSTLAN FDGKLVILGG GDCSESSSEI WCVEIALETR QGDQIWGVVK SVSIVSRDLP MRHVIELCRT VMV
Arabidopsis Description
F-box/kelch-repeat protein At2g29830 [Source:UniProtKB/Swiss-Prot;Acc:O82373]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.