Factsheet for Bra030283.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15875	Canola	cytosol	69.58	65.68
CDX99574	Canola	cytosol	58.39	49.12
AT2G29860.1	Thale cress	cytosol	33.92	40.42
Bra030282.1-P	Field mustard	cytosol	44.76	39.63
AT2G29810.1	Thale cress	cytosol	42.31	31.59
AT2G29780.1	Thale cress	cytosol	41.61	29.9
AT2G29830.1	Thale cress	cytosol	39.86	29.77
AT2G29770.1	Thale cress	cytosol	38.81	28.68
Bra031212.1-P	Field mustard	cytosol	37.76	27.76
AT2G29820.1	Thale cress	cytosol	36.01	26.55
Bra030269.1-P	Field mustard	cytosol	32.52	25.2
Bra033610.1-P	Field mustard	plastid	32.52	24.73
Bra025310.1-P	Field mustard	cytosol, plastid	32.17	24.66
AT2G29600.1	Thale cress	nucleus	35.31	24.34
KRH64149	Soybean	cytosol	29.37	23.4
AT2G29800.1	Thale cress	cytosol	33.57	23.19
PGSC0003DMT400042717	Potato	cytosol	27.97	22.41
Bra033606.1-P	Field mustard	cytosol	31.47	22.39
Solyc04g051870.1.1	Tomato	extracellular	27.62	22.13
VIT_07s0031g01580.t01	Wine grape	plastid	26.92	21.33
KRH53797	Soybean	cytosol	26.92	21.27
GSMUA_Achr2P14860_001	Banana	cytosol, endoplasmic reticulum, plastid	26.57	20.38
EER97716	Sorghum	plastid	26.22	19.84
TraesCS2B01G130200.1	Wheat	cytosol, endoplasmic reticulum, plastid	25.87	19.63
Zm00001d007152_P001	Maize	plastid	25.52	19.41
TraesCS2A01G111200.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	25.52	19.36
Os07t0673700-01	Rice	cytosol	24.13	18.21
HORVU2Hr1G019280.1	Barley	cytosol	19.58	14.78
KRG89620	Soybean	cytosol	5.59	11.94
TraesCS2D01G111900.1	Wheat	nucleus	16.43	10.33

Protein Annotations

EnsemblPlants:Bra030283.1	EnsemblPlants:Bra030283.1-P	EnsemblPlantsGene:Bra030283	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box_dom	InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
PANTHER:PTHR24414	PANTHER:PTHR24414:SF23	PFAM:PF00646	PFAM:PF01344	SEG:seg	SMART:SM00612
SUPFAM:SSF117281	UniParc:UPI0002543E1D	UniProt:M4ENB3	MapMan:35.1	:	:

Description

AT2G29810 (E=3e-057) | kelch repeat-containing F-box family protein

Coordinates

chrA04:+:9373237..9374097

Molecular Weight (calculated)

32446.8 Da

IEP (calculated)

10.683

GRAVY (calculated)

-0.715

Length

286 amino acids

Sequence
(BLAST)

001: MAQMPGGDRN KKRQEEEEEV KKSFVHLPYD LTEHCLAITA RRHYPNLSLA SKSFRRILRS PELYQRRSTL GVTEPVLYAS VGFPPSETPS WHTLHRDHFS
101: LRLRKIASLP SRLLTAVATV GTEMYVLGGS VGGNPTSDVN LIDCRFHTSR SLPRMKRARS RAVAGAIDGK VYVIGGCRKK SDDWVEVFDV KTQAWRDIPA
201: VLPRAHWEGQ FVACAVMDGK IFVLDPSASP GHIIRNPKTK PEPNRKNRDR NRTENYKNPN GSYISKSEKP KPNRDRTENR TGTRIF

Best Arabidopsis Sequence Match ( AT2G29810.1 )
(BLAST)

001: MAVISETSDE GSNGGAANKK PQEEEENIPP IPKELPEELI VIIVALVRRY HYPKLSLISK AYRDLISSPE LFQTRSRLGF TEPVLYTSIG FPPFDLPSWY
101: ILHRISLQFK QITSLPSMLP GSAVVTIDYK MYVLGGFIGL NQPVSTMIVI DCRFHTYREL PSMQRDRGGA AAGVIDGKIY VIGGCKKRYN DWVEVFDVEN
201: ESWETVPGPY PNVASESVEF SQYAVMEQKI YILDPLFCLT YEPRKRRFEA WGRRSQQRRY ESCCVVNDML CTVDSTCSHG YPIVVYDPKG MVWRPVKGVQ
301: SSDLPNLVYY ESRMANFGGK LVILGGNQSR DRKDSYLEKD IWCIEIALEK REDGDIWGHV ESRSVVLSSS KWPLIALSRS VTV

Arabidopsis Description

Putative F-box/kelch-repeat protein At2g29810 [Source:UniProtKB/Swiss-Prot;Acc:O82375]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.