Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G29860.1 | Thale cress | cytosol | 34.46 | 55.0 |
| AT2G29830.1 | Thale cress | cytosol | 51.44 | 51.44 |
| AT2G29770.1 | Thale cress | cytosol | 50.91 | 50.39 |
| CDY15873 | Canola | cytosol | 21.41 | 50.31 |
| CDX99573 | Canola | cytosol | 42.04 | 50.0 |
| AT2G29600.1 | Thale cress | nucleus | 54.05 | 49.88 |
| Bra030282.1-P | Field mustard | cytosol | 42.04 | 49.85 |
| AT2G29780.1 | Thale cress | cytosol | 51.44 | 49.5 |
| AT2G29800.1 | Thale cress | cytosol | 53.0 | 49.03 |
| CDX99574 | Canola | cytosol | 42.3 | 47.65 |
| AT2G29820.1 | Thale cress | cytosol | 47.52 | 46.91 |
| CDY15875 | Canola | cytosol | 36.55 | 46.2 |
| AT1G19460.1 | Thale cress | cytosol | 47.52 | 43.75 |
| AT1G19470.1 | Thale cress | cytosol | 46.48 | 43.2 |
| Bra030283.1-P | Field mustard | cytosol | 31.59 | 42.31 |
| AT2G21680.1 | Thale cress | cytosol | 44.65 | 39.86 |
| AT3G27910.1 | Thale cress | extracellular, golgi | 26.63 | 34.69 |
| AT2G21950.1 | Thale cress | cytosol | 33.68 | 34.68 |
| AT4G39240.1 | Thale cress | cytosol, nucleus, peroxisome | 32.9 | 33.6 |
| KRG89620 | Soybean | cytosol | 11.75 | 33.58 |
| KRH64149 | Soybean | cytosol | 31.33 | 33.43 |
| KRH53797 | Soybean | cytosol | 30.03 | 31.77 |
| AT4G14905.2 | Thale cress | plastid | 30.29 | 31.18 |
| VIT_07s0031g01580.t01 | Wine grape | plastid | 28.72 | 30.47 |
| PGSC0003DMT400042717 | Potato | cytosol | 27.94 | 29.97 |
| Solyc04g051870.1.1 | Tomato | extracellular | 27.42 | 29.41 |
| GSMUA_Achr2P14860_001 | Banana | cytosol, endoplasmic reticulum, plastid | 24.54 | 25.2 |
| TraesCS2A01G111200.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 23.76 | 24.14 |
| TraesCS2B01G130200.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 23.76 | 24.14 |
| Os07t0673700-01 | Rice | cytosol | 21.93 | 22.16 |
| EER97716 | Sorghum | plastid | 21.67 | 21.96 |
| Zm00001d007152_P001 | Maize | plastid | 21.15 | 21.54 |
| HORVU2Hr1G019280.1 | Barley | cytosol | 18.8 | 19.0 |
| TraesCS2D01G111900.1 | Wheat | nucleus | 18.54 | 15.6 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:817531 | ProteinID:AAC35220.1 | ProteinID:AEC08307.1 | ArrayExpress:AT2G29810 |
| EnsemblPlantsGene:AT2G29810 | RefSeq:AT2G29810 | TAIR:AT2G29810 | RefSeq:AT2G29810-TAIR-G | EnsemblPlants:AT2G29810.1 | TAIR:AT2G29810.1 |
| Unigene:At.66274 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller |
| InterPro:Kelch_1 | RefSeq:NP_180542.1 | UniProt:O82375 | PFAM:PF01344 | PANTHER:PTHR24414 | PANTHER:PTHR24414:SF23 |
| SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI00000AAA5B | SEG:seg | : | : |
Description
Putative F-box/kelch-repeat protein At2g29810 [Source:UniProtKB/Swiss-Prot;Acc:O82375]
Coordinates
chr2:-:12726102..12727253
Molecular Weight (calculated)
43526.3 Da
IEP (calculated)
6.375
GRAVY (calculated)
-0.231
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVISETSDE GSNGGAANKK PQEEEENIPP IPKELPEELI VIIVALVRRY HYPKLSLISK AYRDLISSPE LFQTRSRLGF TEPVLYTSIG FPPFDLPSWY
101: ILHRISLQFK QITSLPSMLP GSAVVTIDYK MYVLGGFIGL NQPVSTMIVI DCRFHTYREL PSMQRDRGGA AAGVIDGKIY VIGGCKKRYN DWVEVFDVEN
201: ESWETVPGPY PNVASESVEF SQYAVMEQKI YILDPLFCLT YEPRKRRFEA WGRRSQQRRY ESCCVVNDML CTVDSTCSHG YPIVVYDPKG MVWRPVKGVQ
301: SSDLPNLVYY ESRMANFGGK LVILGGNQSR DRKDSYLEKD IWCIEIALEK REDGDIWGHV ESRSVVLSSS KWPLIALSRS VTV
101: ILHRISLQFK QITSLPSMLP GSAVVTIDYK MYVLGGFIGL NQPVSTMIVI DCRFHTYREL PSMQRDRGGA AAGVIDGKIY VIGGCKKRYN DWVEVFDVEN
201: ESWETVPGPY PNVASESVEF SQYAVMEQKI YILDPLFCLT YEPRKRRFEA WGRRSQQRRY ESCCVVNDML CTVDSTCSHG YPIVVYDPKG MVWRPVKGVQ
301: SSDLPNLVYY ESRMANFGGK LVILGGNQSR DRKDSYLEKD IWCIEIALEK REDGDIWGHV ESRSVVLSSS KWPLIALSRS VTV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.