Factsheet for Bra033149.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25279	Canola	cytosol	92.87	96.58
Bra003270.1-P	Field mustard	cytosol	82.08	82.08
AT3G57150.1	Thale cress	cytosol	75.69	73.27
Os04t0576300-01	Rice	nucleus, plastid	26.51	72.86
TraesCS2D01G156900.1	Wheat	cytosol	68.37	70.57
Os11t0598700-00	Rice	mitochondrion	25.96	70.3
PGSC0003DMT400018869	Potato	cytosol	71.3	68.06
TraesCS2D01G157000.1	Wheat	nucleus	68.92	67.81
VIT_08s0007g00190.t01	Wine grape	cytosol	70.2	65.53
KRH43875	Soybean	nucleus	69.47	65.52
Zm00001d008327_P001	Maize	plasma membrane	68.92	64.67
KRH10580	Soybean	nucleus	69.47	64.52
EES02707	Sorghum	cytosol	68.74	64.38
EER99769	Sorghum	cytosol, nucleus, plastid	68.56	63.99
Solyc02g081810.2.1	Tomato	nucleus	69.84	63.99
Zm00001d040293_P001	Maize	cytosol, nucleus, plastid	67.64	63.9
Os07t0636000-01	Rice	nucleus	69.47	63.33
Zm00001d022265_P001	Maize	cytosol, nucleus, plastid	67.09	62.95
Os03t0370500-02	Rice	nucleus	67.82	62.77
TraesCS2B01G177000.1	Wheat	nucleus	69.65	62.77
TraesCS2A01G151800.1	Wheat	cytosol	69.47	62.5
TraesCS2A01G151900.1	Wheat	cytosol, nucleus, plastid	69.1	62.48
GSMUA_Achr11P...	Banana	cytosol	57.4	61.93
GSMUA_Achr11P...	Banana	nucleus	67.09	57.61
HORVU2Hr1G027370.1	Barley	cytosol	61.61	52.49
HORVU2Hr1G027400.5	Barley	plastid	61.43	49.19
GSMUA_Achr8P15080_001	Banana	nucleus	59.05	37.04
Bra008756.1-P	Field mustard	plastid	6.22	6.51

Protein Annotations

MapMan:17.1.1.2.2.1.1	Gene3D:2.30.130.10	Gene3D:2.30.130.70	Gene3D:3.30.2350.10	EnsemblPlantsGene:Bra033149	EnsemblPlants:Bra033149.1
EnsemblPlants:Bra033149.1-P	ncoils:Coil	InterPro:Dyskerin-like	GO:GO:0001522	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139	GO:GO:0006396	GO:GO:0008150
GO:GO:0008152	GO:GO:0009451	GO:GO:0009982	GO:GO:0009987	InterPro:IPR002478	InterPro:IPR036974
UniProt:M4EWG5	PFAM:PF01472	PFAM:PF01509	PFAM:PF08068	PFAM:PF16198	PFscan:PS50890
InterPro:PUA	InterPro:PUA-like_sf	InterPro:PUA_sf	InterPro:PsdUridine_synth_N	InterPro:PsdUridine_synth_cat_dom_sf	SMART:SM00359
SMART:SM01136	SUPFAM:SSF55120	SUPFAM:SSF88697	TIGRFAMs:TIGR00425	InterPro:TruB_C	UniParc:UPI00025455BC
SEG:seg	InterPro:tRNA_PsdUridine_synth_B_fam	:	:	:	:

Description

AT3G57150 (E=6e-167) NAP57, AtNAP57, CBF5, AtCBF5 | NAP57 (Arabidopsis thaliana homologue of NAP57); pseudouridine synthase

Coordinates

chrA02:-:16981987..16983690

Molecular Weight (calculated)

60905.4 Da

IEP (calculated)

9.964

GRAVY (calculated)

-0.692

Length

547 amino acids

Sequence
(BLAST)

001: MTEVEEVAAE TGEYMIKPQS FTPAIDTSQW PLLLKNYDRL NVRTGHYTPI SSGHSPLKRP LLDYIRYGVI NLDKPSNPSS HEVVAWIKRI LRVEKTGHSG
101: TLDPKVTGNL IVCIDRATRL VKSQQGAGKE YVCVARLHSA VPDVAKVARA LESLTGAVFQ RPPLISAVKR QLRIRTIYQS KLLEYDADRH LVVFWVSCEA
201: GTYIRTMCVH LGLLLGVGAH MQELRRVRSG ILGENDNMVT MHDVMDAQWM YDNYKDESYL RRVIMPLEVI LTSYKRLVVK DSAVNAICYG AKLMIPGLLR
301: FENDIDVGTE VVLMTTKGEA IAVIKRVVMD RDTYPRKWGL GPRASMKKKL IADGKLDKHG KPNEKTPLEW SRNVVVLPTG GDAMIAGAAA APEGKVEAVS
401: GEVRKRKHDD SSDSPAPVST KKAKTKDLEG GEVEEKVKAK KKKDKAEGKE EEAGSEKKEK KKKKDKEEDK EELATPKSEK KKKKKSKEAD EAAAANGEDV
501: SAAEKSEKKK KKKSKETDEA AAGESAEKSE KKKKKDKKKK SKDSDDE

Best Arabidopsis Sequence Match ( AT3G57150.1 )
(BLAST)

001: MAEVDISHSK KKKQDKTEND AADTGDYMIK PQSFTPAIDT SQWPILLKNY DRLNVRTGHY TPISAGHSPL KRPLQEYIRY GVINLDKPAN PSSHEVVAWI
101: KRILRVEKTG HSGTLDPKVT GNLIVCIDRA TRLVKSQQGA GKEYVCVARL HSAVPDVAKV ARALESLTGA VFQRPPLISA VKRQLRIRTI YESKLLEYDA
201: DRHLVVFWVS CEAGTYIRTM CVHLGLLLGV GGHMQELRRV RSGILGENNN MVTMHDVMDA QFVYDNSRDE SYLRRVIMPL EMILTSYKRL VVKDSAVNAI
301: CYGAKLMIPG LLRFENDIDV GTEVVLMTTK GEAIAVGIAE MTTSVMATCD HGVVAKIKRV VMDRDTYPRK WGLGPRASMK KKLIADGKLD KHGKPNEKTP
401: VEWSRNVVLP TGGDAIIAGA AAAPEEIKAD AENGEAGEAR KRKHDDSSDS PAPVTTKKSK TKEVEGEEAE EKVKSSKKKK KKDKEEEKEE EAGSEKKEKK
501: KKKDKKEEVI EEVASPKSEK KKKKKSKDTE AAVDAEDESA AEKSEKKKKK KDKKKKNKDS EDDEE

Arabidopsis Description

CBF5Uncharacterized protein At3g57150 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVF3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.