Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33839 | Canola | cytosol | 76.99 | 83.49 |
| Bra003270.1-P | Field mustard | cytosol | 79.82 | 82.45 |
| CDX67680 | Canola | cytosol | 79.82 | 82.45 |
| CDY25279 | Canola | cytosol | 75.04 | 80.61 |
| CDY50671 | Canola | cytosol | 75.04 | 80.61 |
| Bra033149.1-P | Field mustard | cytosol | 73.27 | 75.69 |
| TraesCS2D01G156900.1 | Wheat | cytosol | 68.5 | 73.02 |
| Os04t0576300-01 | Rice | nucleus, plastid | 25.49 | 72.36 |
| PGSC0003DMT400018869 | Potato | cytosol | 72.92 | 71.9 |
| VIT_08s0007g00190.t01 | Wine grape | cytosol | 73.1 | 70.48 |
| KRH43875 | Soybean | nucleus | 72.04 | 70.17 |
| KRH10580 | Soybean | nucleus | 72.92 | 69.95 |
| TraesCS2D01G157000.1 | Wheat | nucleus | 68.5 | 69.6 |
| Solyc02g081810.2.1 | Tomato | nucleus | 73.45 | 69.51 |
| GSMUA_Achr11P... | Banana | cytosol | 61.77 | 68.84 |
| Os11t0598700-00 | Rice | mitochondrion | 24.6 | 68.81 |
| EES02707 | Sorghum | cytosol | 70.44 | 68.15 |
| EER99769 | Sorghum | cytosol, nucleus, plastid | 70.27 | 67.75 |
| Zm00001d022265_P001 | Maize | cytosol, nucleus, plastid | 69.73 | 67.58 |
| Zm00001d040293_P001 | Maize | cytosol, nucleus, plastid | 69.2 | 67.53 |
| Zm00001d008327_P001 | Maize | plasma membrane | 69.38 | 67.24 |
| Os03t0370500-02 | Rice | nucleus | 69.73 | 66.67 |
| Os07t0636000-01 | Rice | nucleus | 70.62 | 66.5 |
| TraesCS2A01G151800.1 | Wheat | cytosol | 70.09 | 65.13 |
| TraesCS2A01G151900.1 | Wheat | cytosol, nucleus, plastid | 69.73 | 65.12 |
| TraesCS2B01G177000.1 | Wheat | nucleus | 69.91 | 65.07 |
| GSMUA_Achr11P... | Banana | nucleus | 68.85 | 61.07 |
| HORVU2Hr1G027370.1 | Barley | cytosol | 62.65 | 55.14 |
| HORVU2Hr1G027400.5 | Barley | plastid | 62.12 | 51.39 |
| GSMUA_Achr8P15080_001 | Banana | nucleus | 60.35 | 39.11 |
| AT5G14460.1 | Thale cress | plastid | 5.84 | 6.11 |
Protein Annotations
| MapMan:17.1.1.2.2.1.1 | Gene3D:2.30.130.70 | Gene3D:3.30.2350.10 | EntrezGene:824882 | UniProt:A0A178VJL1 | EMBL:AB493656 |
| ProteinID:AEE79621.1 | EMBL:AF234984 | ArrayExpress:AT3G57150 | EnsemblPlantsGene:AT3G57150 | RefSeq:AT3G57150 | TAIR:AT3G57150 |
| RefSeq:AT3G57150-TAIR-G | EnsemblPlants:AT3G57150.1 | TAIR:AT3G57150.1 | EMBL:AY049247 | Unigene:At.19647 | EMBL:BT003810 |
| UniProt:C0SVF3 | ProteinID:CAB72185.1 | ncoils:Coil | InterPro:Dyskerin-like | EMBL:F20038 | GO:GO:0000495 |
| GO:GO:0001522 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006364 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009451 | GO:GO:0009506 | GO:GO:0009982 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0030529 |
| GO:GO:0031118 | GO:GO:0031120 | GO:GO:0031429 | GO:GO:0042254 | GO:GO:1990481 | InterPro:IPR002478 |
| Symbol:NAP57 | RefSeq:NP_191274.1 | ProteinID:OAP05505.1 | PFAM:PF01472 | PFAM:PF01509 | PFAM:PF08068 |
| PFAM:PF16198 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50890 | InterPro:PUA | InterPro:PUA-like_sf |
| InterPro:PsdUridine_synth_N | InterPro:PsdUridine_synth_cat_dom_sf | UniProt:Q9LD90 | SMART:SM00359 | SMART:SM01136 | SUPFAM:SSF55120 |
| SUPFAM:SSF88697 | TIGRFAMs:TIGR00425 | TIGRFAMs:TIGR00451 | InterPro:TruB_C | UniParc:UPI000000C17B | InterPro:Uncharacterised_CHP00451 |
| SEG:seg | InterPro:tRNA_PsdUridine_synth_B_fam | : | : | : | : |
Description
CBF5Uncharacterized protein At3g57150 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVF3]
Coordinates
chr3:-:21153815..21156075
Molecular Weight (calculated)
63029.7 Da
IEP (calculated)
9.736
GRAVY (calculated)
-0.716
Length
565 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEVDISHSK KKKQDKTEND AADTGDYMIK PQSFTPAIDT SQWPILLKNY DRLNVRTGHY TPISAGHSPL KRPLQEYIRY GVINLDKPAN PSSHEVVAWI
101: KRILRVEKTG HSGTLDPKVT GNLIVCIDRA TRLVKSQQGA GKEYVCVARL HSAVPDVAKV ARALESLTGA VFQRPPLISA VKRQLRIRTI YESKLLEYDA
201: DRHLVVFWVS CEAGTYIRTM CVHLGLLLGV GGHMQELRRV RSGILGENNN MVTMHDVMDA QFVYDNSRDE SYLRRVIMPL EMILTSYKRL VVKDSAVNAI
301: CYGAKLMIPG LLRFENDIDV GTEVVLMTTK GEAIAVGIAE MTTSVMATCD HGVVAKIKRV VMDRDTYPRK WGLGPRASMK KKLIADGKLD KHGKPNEKTP
401: VEWSRNVVLP TGGDAIIAGA AAAPEEIKAD AENGEAGEAR KRKHDDSSDS PAPVTTKKSK TKEVEGEEAE EKVKSSKKKK KKDKEEEKEE EAGSEKKEKK
501: KKKDKKEEVI EEVASPKSEK KKKKKSKDTE AAVDAEDESA AEKSEKKKKK KDKKKKNKDS EDDEE
101: KRILRVEKTG HSGTLDPKVT GNLIVCIDRA TRLVKSQQGA GKEYVCVARL HSAVPDVAKV ARALESLTGA VFQRPPLISA VKRQLRIRTI YESKLLEYDA
201: DRHLVVFWVS CEAGTYIRTM CVHLGLLLGV GGHMQELRRV RSGILGENNN MVTMHDVMDA QFVYDNSRDE SYLRRVIMPL EMILTSYKRL VVKDSAVNAI
301: CYGAKLMIPG LLRFENDIDV GTEVVLMTTK GEAIAVGIAE MTTSVMATCD HGVVAKIKRV VMDRDTYPRK WGLGPRASMK KKLIADGKLD KHGKPNEKTP
401: VEWSRNVVLP TGGDAIIAGA AAAPEEIKAD AENGEAGEAR KRKHDDSSDS PAPVTTKKSK TKEVEGEEAE EKVKSSKKKK KKDKEEEKEE EAGSEKKEKK
501: KKKDKKEEVI EEVASPKSEK KKKKKSKDTE AAVDAEDESA AEKSEKKKKK KDKKKKNKDS EDDEE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.