Factsheet for Os11t0598700-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
nucleus 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os05t0502800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G57150.1	Os05t0502800-01	AT1G03530.1	17712600

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0576300-01	Rice	nucleus, plastid	77.23	78.39
TraesCS2D01G156900.1	Wheat	cytosol	77.23	29.43
TraesCS2D01G157000.1	Wheat	nucleus	77.23	28.06
CDY33839	Canola	cytosol	69.8	27.06
CDY25279	Canola	cytosol	70.3	27.0
CDY50671	Canola	cytosol	69.8	26.81
EER99769	Sorghum	cytosol, nucleus, plastid	77.23	26.62
Zm00001d022265_P001	Maize	cytosol, nucleus, plastid	76.73	26.59
Os03t0370500-02	Rice	nucleus	77.23	26.4
Os07t0636000-01	Rice	nucleus	78.22	26.33
Bra033149.1-P	Field mustard	cytosol	70.3	25.96
TraesCS2A01G151900.1	Wheat	cytosol, nucleus, plastid	77.72	25.95
TraesCS2B01G177000.1	Wheat	nucleus	77.72	25.86
TraesCS2A01G151800.1	Wheat	cytosol	77.72	25.82
Bra003270.1-P	Field mustard	cytosol	69.8	25.78
CDX67680	Canola	cytosol	69.8	25.78
PGSC0003DMT400018869	Potato	cytosol	72.28	25.48
GSMUA_Achr11P...	Banana	cytosol	61.88	24.65
Solyc02g081810.2.1	Tomato	nucleus	72.77	24.62
AT3G57150.1	Thale cress	cytosol	68.81	24.6
HORVU2Hr1G027370.1	Barley	cytosol	77.72	24.45
VIT_08s0007g00190.t01	Wine grape	cytosol	70.79	24.4
KRH43875	Soybean	nucleus	69.8	24.31
KRH10580	Soybean	nucleus	69.8	23.94
HORVU2Hr1G027400.5	Barley	plastid	77.23	22.84
GSMUA_Achr11P...	Banana	nucleus	69.8	22.14
GSMUA_Achr8P15080_001	Banana	nucleus	66.83	15.48

Protein Annotations

MapMan:17.1.1.2.2.1.1	Gene3D:3.30.2350.10	UniProt:A0A0P0Y401	ProteinID:BAT14734.1	GO:GO:0001522	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139	GO:GO:0006396
GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009982	GO:GO:0009987	EnsemblPlantsGene:Os11g0598700
EnsemblPlants:Os11t0598700-00	PFAM:PF01509	PFAM:PF16198	PANTHER:PTHR23127	InterPro:PsdUridine_synth_N	InterPro:PsdUridine_synth_cat_dom_sf
SUPFAM:SSF55120	TIGRFAMs:TIGR00425	InterPro:TruB_C	UniParc:UPI000393AC2A	InterPro:tRNA_PsdUridine_synth_B_fam	:

Description

Similar to predicted protein. (Os11t0598700-00)

Coordinates

chr11:+:22872253..22873006

Molecular Weight (calculated)

22891.2 Da

IEP (calculated)

10.444

GRAVY (calculated)

-0.096

Length

202 amino acids

Sequence
(BLAST)

001: SHASLRNLHP LIAALPSRPP RVRLDRRSVV AWIKRLLRVN KTGHSGTLDP KVTGNLIVCV DLATRLVKSQ QGAGKEYGCV ARFHADRPRR ALEALTGAVF
101: QRPPLISAVK WQLRVRTIYE SKLLEHDAER HLAVFWISCE AGTYVRTLCV HLGLLLGVDA HMQELRRVRS RIHGEQDNMV TIHDVMDARL AMYCCSCFQL
201: MQ

Best Arabidopsis Sequence Match ( AT3G57150.1 )
(BLAST)

001: MAEVDISHSK KKKQDKTEND AADTGDYMIK PQSFTPAIDT SQWPILLKNY DRLNVRTGHY TPISAGHSPL KRPLQEYIRY GVINLDKPAN PSSHEVVAWI
101: KRILRVEKTG HSGTLDPKVT GNLIVCIDRA TRLVKSQQGA GKEYVCVARL HSAVPDVAKV ARALESLTGA VFQRPPLISA VKRQLRIRTI YESKLLEYDA
201: DRHLVVFWVS CEAGTYIRTM CVHLGLLLGV GGHMQELRRV RSGILGENNN MVTMHDVMDA QFVYDNSRDE SYLRRVIMPL EMILTSYKRL VVKDSAVNAI
301: CYGAKLMIPG LLRFENDIDV GTEVVLMTTK GEAIAVGIAE MTTSVMATCD HGVVAKIKRV VMDRDTYPRK WGLGPRASMK KKLIADGKLD KHGKPNEKTP
401: VEWSRNVVLP TGGDAIIAGA AAAPEEIKAD AENGEAGEAR KRKHDDSSDS PAPVTTKKSK TKEVEGEEAE EKVKSSKKKK KKDKEEEKEE EAGSEKKEKK
501: KKKDKKEEVI EEVASPKSEK KKKKKSKDTE AAVDAEDESA AEKSEKKKKK KDKKKKNKDS EDDEE

Arabidopsis Description

CBF5Uncharacterized protein At3g57150 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SVF3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.