Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- plastid 4
- endoplasmic reticulum 4
- extracellular 3
- vacuole 3
- plasma membrane 3
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88073 | Canola | cytosol | 63.58 | 43.39 |
| CDX80412 | Canola | cytosol | 63.29 | 43.37 |
| CDY34755 | Canola | cytosol | 39.02 | 18.91 |
| GSMUA_Achr11P... | Banana | cytosol | 37.86 | 18.88 |
| CDX76792 | Canola | cytosol | 38.44 | 18.63 |
| CDY36167 | Canola | cytosol | 38.15 | 18.49 |
| CDY45599 | Canola | cytosol | 38.15 | 18.49 |
| Solyc01g088370.2.1 | Tomato | nucleus, plastid | 37.57 | 18.13 |
| PGSC0003DMT400004200 | Potato | cytosol | 37.57 | 18.13 |
| Os10t0569200-01 | Rice | cytosol, golgi, nucleus, plasma membrane, plastid | 37.28 | 17.94 |
| EER91898 | Sorghum | cytosol | 36.71 | 17.64 |
| Zm00001d030011_P001 | Maize | plasma membrane | 36.42 | 17.5 |
| TraesCS5A01G442500.1 | Wheat | cytosol, golgi | 36.13 | 17.48 |
| TraesCS4B01G083200.1 | Wheat | cytosol | 35.55 | 17.45 |
| HORVU4Hr1G014100.3 | Barley | cytosol | 36.13 | 17.34 |
| HORVU5Hr1G106440.1 | Barley | cytosol | 36.13 | 17.34 |
| TraesCS5B01G446600.1 | Wheat | cytosol | 36.13 | 17.34 |
| TraesCS5D01G449900.2 | Wheat | cytosol, nucleus, unclear | 36.13 | 17.34 |
| TraesCS4A01G232600.1 | Wheat | cytosol | 35.26 | 16.92 |
| TraesCS4D01G081300.1 | Wheat | cytosol, nucleus | 34.97 | 16.78 |
| TraesCS6B01G307400.1 | Wheat | cytosol | 32.37 | 16.28 |
| CDY66663 | Canola | mitochondrion | 8.09 | 15.82 |
| TraesCS6D01G406100.1 | Wheat | cytosol | 20.81 | 15.69 |
| HORVU5Hr1G008250.6 | Barley | cytosol, mitochondrion, plastid | 38.44 | 14.98 |
| CDX68240 | Canola | nucleus | 19.94 | 13.45 |
| CDY11124 | Canola | mitochondrion | 18.5 | 11.29 |
| CDY66322 | Canola | golgi, plastid | 6.07 | 10.14 |
Protein Annotations
| MapMan:35.1 | GO:A0A078DXS7 | EnsemblPlants:CDX94125 | ProteinID:CDX94125 | ProteinID:CDX94125.1 | InterPro:EIF3B |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005852 | GO:GO:0006412 |
| GO:GO:0006413 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0031369 | EnsemblPlantsGene:GSBRNA2T00157040001 | PFAM:PF08662 | PANTHER:PTHR14068 | SUPFAM:SSF82171 |
| InterPro:TIF_beta_prop-like | UniParc:UPI0004EDAD10 | SEG:seg | : | : | : |
Description
BnaC07g37590D
Coordinates
chrLK031879:+:840562..842095
Molecular Weight (calculated)
39425.3 Da
IEP (calculated)
7.950
GRAVY (calculated)
-0.126
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTKYIFLCS TASFFMFTAD KRVPSRRIFD PLSFFFLFLF LSLKVEEFDI SPGEKYLVTY SKPKPSDPNT KKFNLLGNAP LLLDDVIDIS WSPTQAVLAI
101: LLKASDKQPV KVVLLQFPNN VKLAEKDLTA ILGDCTMRWQ SNGEYLAVNT YGGFEFFRIK EEGIPTDSLR VDKKILAFAW EPSGHRFAVI YGDEPTLSVS
201: FYSMKKTPGK VTELTTLSNR QADALFWSPK GNRIVLAGLK EGNLEFFDVD QLAQISPVAN VVANQVAWNQ SGKYVATVFT TPQEKFHSDC HSEPDDPRES
301: FTIWSSDGKR LFVHQCQFPI TQVKYNYDIV SLGRIQNWLT HILYFR
101: LLKASDKQPV KVVLLQFPNN VKLAEKDLTA ILGDCTMRWQ SNGEYLAVNT YGGFEFFRIK EEGIPTDSLR VDKKILAFAW EPSGHRFAVI YGDEPTLSVS
201: FYSMKKTPGK VTELTTLSNR QADALFWSPK GNRIVLAGLK EGNLEFFDVD QLAQISPVAN VVANQVAWNQ SGKYVATVFT TPQEKFHSDC HSEPDDPRES
301: FTIWSSDGKR LFVHQCQFPI TQVKYNYDIV SLGRIQNWLT HILYFR
001: MAGVDGHVVD NSWPIIRWAG GKDDKYFATL IKNTTATQEG AAVNFDDVVG MSWSPTEPIL SLLKGDVKNQ PKKVVFLQIP GYVELMHKDI LSVSDCKMYW
101: QSKGKYLAVQ VTRHTCSLFE LFRFNKVQGI TTEALEVDEK ILAFAWEPSG HRFAVIHGDQ SKPNVSFYSM ETPQNPGKVS KLATFDDKEA DALFWSPRGK
201: HIVLAGLKAA SMAISSFSTW ISLRCSR
101: QSKGKYLAVQ VTRHTCSLFE LFRFNKVQGI TTEALEVDEK ILAFAWEPSG HRFAVIHGDQ SKPNVSFYSM ETPQNPGKVS KLATFDDKEA DALFWSPRGK
201: HIVLAGLKAA SMAISSFSTW ISLRCSR
Arabidopsis Description
DPP6 N-terminal domain-like protein [Source:UniProtKB/TrEMBL;Acc:F4I057]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.