Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d027706_P004 | Maize | nucleus | 96.37 | 94.16 |
| TraesCS4A01G370000.1 | Wheat | nucleus | 84.95 | 84.68 |
| TraesCS4B01G317800.1 | Wheat | nucleus | 84.74 | 84.47 |
| Os03t0151700-01 | Rice | nucleus | 83.46 | 83.19 |
| HORVU4Hr1G083410.1 | Barley | endoplasmic reticulum | 84.85 | 78.48 |
| GSMUA_Achr11P... | Banana | cytosol, golgi, plastid | 71.61 | 71.38 |
| VIT_08s0007g04690.t01 | Wine grape | nucleus | 63.39 | 62.4 |
| KRH67774 | Soybean | nucleus, plastid | 61.9 | 61.51 |
| KRG96051 | Soybean | nucleus | 61.26 | 60.81 |
| CDY22910 | Canola | nucleus | 59.55 | 59.94 |
| Solyc10g039190.1.1 | Tomato | nucleus | 60.62 | 59.79 |
| PGSC0003DMT400066026 | Potato | nucleus | 60.62 | 59.79 |
| CDY54973 | Canola | nucleus | 59.23 | 59.61 |
| Bra039543.1-P | Field mustard | nucleus | 59.23 | 58.79 |
| AT3G21540.1 | Thale cress | nucleus | 59.55 | 58.43 |
| PGSC0003DMT400034236 | Potato | cytosol, nucleus, plastid | 57.84 | 57.72 |
| EER98280 | Sorghum | cytosol, nucleus, plastid | 7.47 | 20.29 |
| EES08930 | Sorghum | cytosol | 6.4 | 18.63 |
| KXG20501 | Sorghum | nucleus | 11.74 | 16.74 |
| EES12762 | Sorghum | cytosol | 15.05 | 15.9 |
| KXG23186 | Sorghum | plastid | 4.06 | 15.57 |
| EER94850 | Sorghum | plastid | 8.0 | 14.42 |
| EES11818 | Sorghum | nucleus, plastid | 8.96 | 13.95 |
| OQU81634 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 2.13 | 11.11 |
| OQU76815 | Sorghum | plastid | 2.35 | 10.43 |
| OQU89577 | Sorghum | plastid | 2.35 | 10.33 |
| OQU91217 | Sorghum | plastid | 2.67 | 10.16 |
| OQU84751 | Sorghum | plastid | 2.13 | 9.85 |
Protein Annotations
| MapMan:17.1.3.2.1.3.3 | Gene3D:2.130.10.10 | EntrezGene:8085468 | UniProt:C5WXV5 | ncoils:Coil | EnsemblPlants:EER95491 |
| ProteinID:EER95491 | ProteinID:EER95491.1 | InterPro:G-protein_beta_WD-40_rep | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005730 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0030490 | GO:GO:0030515 | GO:GO:0032040 | GO:GO:0034388 | InterPro:IPR001680 | InterPro:IPR015943 |
| InterPro:IPR017986 | PFAM:PF00400 | PFAM:PF04003 | PRINTS:PR00320 | ScanProsite:PS00678 | PFscan:PS50082 |
| PFscan:PS50294 | PANTHER:PTHR19853 | PANTHER:PTHR19853:SF0 | InterPro:Quinoprot_gluc/sorb_DH | InterPro:Quinoprotein_ADH-like_supfam | SMART:SM00320 |
| EnsemblPlantsGene:SORBI_3001G501400 | SUPFAM:SSF50952 | SUPFAM:SSF50998 | InterPro:SSU_processome_Utp12 | UniParc:UPI0001A8305D | InterPro:WD40/YVTN_repeat-like_dom_sf |
| InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | RefSeq:XP_002468493.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:-:77049705..77055488
Molecular Weight (calculated)
103916.0 Da
IEP (calculated)
6.767
GRAVY (calculated)
-0.281
Length
937 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKAYLRYEP ALTFGVIASP ESNVVYDPSG RRLLAAALDR LVAWDLKRGL PSVSFAPSSS SFSLAVSCIA SSPSAAVSSS IASGHADGSI RLWDAETGGC
101: EATLHGHRSA ASALRFGPSG AVLASGSKDC DVILWDVVAQ AGLFRLRGHR DQVTDLVFLD SGKKLVSCSK DKFIRVWDLE TQHCLQIVGG HRSEIWSMDV
201: DPSERFLVSG SADPELQVFR IRQSVEEGED WSKWDVLKLF GEIPRQSKER VANVRFNRDG SLVVCQVAGK TADIYRVLDE TEAARKAKRR VNRKKEKASA
301: KSMIAEDNGT IIDPLPAKNL QNPTVIVTDV FKLFQVLRAS KKICSVAFSP SNPPRGCLAI LSLSLNNNML ETYSVDSEKV SKMYSVEMHG HRSDIRSISL
401: NSEDNLLMST SHNAVKIWNP STGECLRTID SGYGLCSTFV GNRFALVGTQ SGALEIVDIA SGSLTEAIEA HAGSIRSIVP IPDEDGTVGA RGFVTGSADH
501: DVKFWEYQLV QKSDNDSKQL TVTNVRTLKM TEDVLAVSIS PEGKHIAVAL LDCHVKVYHM DTLKPSLNLY GHKLPVLCMD ISSDGALLVT GSADKNLKIW
601: GMDFGDCHRS IFAHSDSVMD VKFVYRTHYM FSVGKDRTVK YWDADKFELL LTLEGHHAEV WCLTISSRGD FIVTGSHDRS IRRWDRTEEQ LFIEEEKEKR
701: LEETFEADLE NDEYRYGQKD DAPDEGSVGV PGRKTKETVT SADAIMDALD TAEEELKRIN QHKMEEQINA KAAKFQPNVI MQGHSPSDYV LNVVSNIRPN
801: DLEQALLALP FSDALKLMSY LKEWSLVPSK VELVCRVCLV LLQTHHNQLT ATPAARSLLT ELKDILYCRV KECKDTIGFN LAAMDHVKEL LAMRSDAPFR
901: DAKAKLMEIK QELSKRSSRV DGDEKRKKKR KKTSAES
101: EATLHGHRSA ASALRFGPSG AVLASGSKDC DVILWDVVAQ AGLFRLRGHR DQVTDLVFLD SGKKLVSCSK DKFIRVWDLE TQHCLQIVGG HRSEIWSMDV
201: DPSERFLVSG SADPELQVFR IRQSVEEGED WSKWDVLKLF GEIPRQSKER VANVRFNRDG SLVVCQVAGK TADIYRVLDE TEAARKAKRR VNRKKEKASA
301: KSMIAEDNGT IIDPLPAKNL QNPTVIVTDV FKLFQVLRAS KKICSVAFSP SNPPRGCLAI LSLSLNNNML ETYSVDSEKV SKMYSVEMHG HRSDIRSISL
401: NSEDNLLMST SHNAVKIWNP STGECLRTID SGYGLCSTFV GNRFALVGTQ SGALEIVDIA SGSLTEAIEA HAGSIRSIVP IPDEDGTVGA RGFVTGSADH
501: DVKFWEYQLV QKSDNDSKQL TVTNVRTLKM TEDVLAVSIS PEGKHIAVAL LDCHVKVYHM DTLKPSLNLY GHKLPVLCMD ISSDGALLVT GSADKNLKIW
601: GMDFGDCHRS IFAHSDSVMD VKFVYRTHYM FSVGKDRTVK YWDADKFELL LTLEGHHAEV WCLTISSRGD FIVTGSHDRS IRRWDRTEEQ LFIEEEKEKR
701: LEETFEADLE NDEYRYGQKD DAPDEGSVGV PGRKTKETVT SADAIMDALD TAEEELKRIN QHKMEEQINA KAAKFQPNVI MQGHSPSDYV LNVVSNIRPN
801: DLEQALLALP FSDALKLMSY LKEWSLVPSK VELVCRVCLV LLQTHHNQLT ATPAARSLLT ELKDILYCRV KECKDTIGFN LAAMDHVKEL LAMRSDAPFR
901: DAKAKLMEIK QELSKRSSRV DGDEKRKKKR KKTSAES
001: MVKAYQRYDA ATSFGVISSV DSNIAYDSTG KYVLAPALEK VGIWHVRQGV CSKTLTPSSS RGGPSLAVTS IASSASSLVA VGYADGSIRI WDTEKGTCEV
101: NFNSHKGAVT ALRYNKVGSM LASGSKDNDI ILWDVVGESG LFRLRGHRDQ VTDLVFLDGG KKLVSSSKDK FLRVWDLETQ HCMQIVSGHH SEVWSVDTDP
201: EERYVVTGSA DQELRFYAVK EYSSNGSLVS DSNANEIKAS EEHSTENKWE ILKLFGEIQR QTKDRVARVR FNVSGKLLAC QMAGKTIEIF RVLDEAEAKQ
301: KAKRRLRRKE KKSSKVGDEN STANGEASAK IELADAVSSP TVLDVFKLLQ VIRAGRKISS FSFCPTAPKE SLGTLALSLN NNSLEFYSLK SSENAKTVTI
401: EHQGHRSDVR SVTLSEDNTL LMSTSHSEVK IWNPSTGSCL RTIDSGYGLC SLIVPQNKYG IVGTKSGVLE IIDIGSATKV EEVKAHGGTI WSITPIPNDS
501: GFVTVSADHE VKFWEYQVKQ KSGKATKKLT VSNVKSMKMN DDVLAVAISP DAKHIAVALL DSTVKVFYMD SLKFYLSLYG HKLPVMCIDI SSDGELIVTG
601: SQDKNLKIWG LDFGDCHKSI FAHGDSVMGV KFVRNTHYLF SIGKDRLVKY WDADKFEHLL TLEGHHAEIW CLAISNRGDF LVTGSHDRSM RRWDRSEEPF
701: FLEEEKEKRL EELFESEIDN AADDRHGPME EIPEEGVAAL AGKKTIDVLS AADSIIDALE VAEDETKRHA AYEEEKTKGK VPEYLPNAVM FGLSPSEYVL
801: RAISNVRTND LEQTLLALPF SDSLKFLCYM KDWSLIPEKV ELVSRIATII LQTHHNQLVT TPSARPILSV LRDILYSEIK ACKDTIGFNL AAMDHVKQMM
901: DARSDAPFKD AKAKLLEIRS QQAKRMASRG DTKMEKKRKK KQKKLEEGQH GHALF
101: NFNSHKGAVT ALRYNKVGSM LASGSKDNDI ILWDVVGESG LFRLRGHRDQ VTDLVFLDGG KKLVSSSKDK FLRVWDLETQ HCMQIVSGHH SEVWSVDTDP
201: EERYVVTGSA DQELRFYAVK EYSSNGSLVS DSNANEIKAS EEHSTENKWE ILKLFGEIQR QTKDRVARVR FNVSGKLLAC QMAGKTIEIF RVLDEAEAKQ
301: KAKRRLRRKE KKSSKVGDEN STANGEASAK IELADAVSSP TVLDVFKLLQ VIRAGRKISS FSFCPTAPKE SLGTLALSLN NNSLEFYSLK SSENAKTVTI
401: EHQGHRSDVR SVTLSEDNTL LMSTSHSEVK IWNPSTGSCL RTIDSGYGLC SLIVPQNKYG IVGTKSGVLE IIDIGSATKV EEVKAHGGTI WSITPIPNDS
501: GFVTVSADHE VKFWEYQVKQ KSGKATKKLT VSNVKSMKMN DDVLAVAISP DAKHIAVALL DSTVKVFYMD SLKFYLSLYG HKLPVMCIDI SSDGELIVTG
601: SQDKNLKIWG LDFGDCHKSI FAHGDSVMGV KFVRNTHYLF SIGKDRLVKY WDADKFEHLL TLEGHHAEIW CLAISNRGDF LVTGSHDRSM RRWDRSEEPF
701: FLEEEKEKRL EELFESEIDN AADDRHGPME EIPEEGVAAL AGKKTIDVLS AADSIIDALE VAEDETKRHA AYEEEKTKGK VPEYLPNAVM FGLSPSEYVL
801: RAISNVRTND LEQTLLALPF SDSLKFLCYM KDWSLIPEKV ELVSRIATII LQTHHNQLVT TPSARPILSV LRDILYSEIK ACKDTIGFNL AAMDHVKQMM
901: DARSDAPFKD AKAKLLEIRS QQAKRMASRG DTKMEKKRKK KQKKLEEGQH GHALF
Arabidopsis Description
Transducin family protein / WD-40 repeat family protein [Source:UniProtKB/TrEMBL;Acc:Q9LVF2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.