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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 8
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr3P09840_001 Banana mitochondrion 82.77 81.74
GSMUA_Achr2P18870_001 Banana mitochondrion, unclear 84.03 81.63
GSMUA_Achr3P18000_001 Banana mitochondrion 79.83 78.19
CDY36283 Canola cytosol 58.82 77.78
Os05t0323900-01 Rice mitochondrion 72.69 74.89
EES17972 Sorghum mitochondrion 73.11 74.68
TraesCS2B01G567600.1 Wheat mitochondrion 70.59 74.67
Solyc06g049080.2.1 Tomato extracellular, nucleus, plastid 71.01 74.12
Zm00001d037859_P002 Maize mitochondrion 72.27 73.19
TraesCS2A01G537100.1 Wheat mitochondrion 70.59 72.73
PGSC0003DMT400042937 Potato mitochondrion 68.91 71.93
TraesCS2D01G538300.1 Wheat mitochondrion 69.75 71.86
CDY00976 Canola mitochondrion 69.75 71.86
Zm00001d009990_P001 Maize mitochondrion 73.11 71.6
Bra034154.1-P Field mustard mitochondrion 68.49 70.56
KRH64185 Soybean mitochondrion 71.01 70.42
AT3G10920.1 Thale cress mitochondrion 68.07 70.13
CDY08564 Canola mitochondrion 67.65 69.7
CDY08566 Canola mitochondrion 67.65 69.7
Bra029879.1-P Field mustard mitochondrion 67.65 69.7
KRH53764 Soybean mitochondrion 70.17 69.29
HORVU2Hr1G117740.2 Barley mitochondrion, plastid 67.23 63.24
VIT_13s0067g02990.t01 Wine grape mitochondrion, plastid 67.23 56.54
GSMUA_Achr10P... Banana vacuole 24.79 26.22
GSMUA_Achr10P... Banana mitochondrion 25.21 25.21
GSMUA_Achr11P... Banana plastid 28.15 22.26
Protein Annotations
Gene3D:1.10.287.990MapMan:10.2.2.2Gene3D:2.40.500.20GO:GO:0003674GO:GO:0003824GO:GO:0004784
GO:GO:0005488GO:GO:0006801GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016491GO:GO:0019430GO:GO:0046872GO:GO:0055114EnsemblPlantsGene:GSMUA_Achr8G21350_001EnsemblPlants:GSMUA_Achr8P21350_001
EnsemblPlants:GSMUA_Achr8T21350_001InterPro:IPR036314InterPro:IPR036324UniProt:M0TSD8InterPro:Mn/Fe_SODInterPro:Mn/Fe_SOD_BS
InterPro:Mn/Fe_SOD_CInterPro:Mn/Fe_SOD_NInterPro:Mn/Fe_SOD_N_sfPFAM:PF00081PFAM:PF02777PIRSF:PIRSF000349
PRINTS:PR01703ScanProsite:PS00088PANTHER:PTHR11404PANTHER:PTHR11404:SF6InterPro:SOD_C_sfSUPFAM:SSF46609
SUPFAM:SSF54719UniParc:UPI000292D1EB::::
Description
Superoxide dismutase [Mn] 3.1, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr8G21350_001]
Coordinates
chr8:-:26254629..26259642
Molecular Weight (calculated)
26288.3 Da
IEP (calculated)
7.659
GRAVY (calculated)
-0.216
Length
238 amino acids
Sequence
(BLAST)
001: MALRTLFSKK AFTTASGFRP IAAGDRCFLR QARGLTVAAL PDLAYDYGAL EPAISGEIMR LHHQKHHQAY VTNYNNALEQ LETAVAKGDA SAVVRLQSAI
101: KFNGGGHINH SIFWKNLKPV NEGGGEPPHS TLGWAIDTDF CSLEALVQKM NAEGAALQGS GWVWLALDKG SKKLCVETTA NQDPLVTKGA NLVPLLGIDV
201: WEHAYYLQYK NVRPDYLKNI WKVINWKYAS EVFDEETA
Best Arabidopsis Sequence Match ( AT3G10920.1 )
(BLAST)
001: MAIRCVASRK TLAGLKETSS RLLRIRGIQT FTLPDLPYDY GALEPAISGE IMQIHHQKHH QAYVTNYNNA LEQLDQAVNK GDASTVVKLQ SAIKFNGGGH
101: VNHSIFWKNL APSSEGGGEP PKGSLGSAID AHFGSLEGLV KKMSAEGAAV QGSGWVWLGL DKELKKLVVD TTANQDPLVT KGGSLVPLVG IDVWEHAYYL
201: QYKNVRPEYL KNVWKVINWK YASEVYEKEN N
Arabidopsis Description
MSD1Superoxide dismutase [Mn] 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O81235]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.