Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 8
- cytosol 1
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr3P09840_001 | Banana | mitochondrion | 82.77 | 81.74 |
GSMUA_Achr2P18870_001 | Banana | mitochondrion, unclear | 84.03 | 81.63 |
GSMUA_Achr3P18000_001 | Banana | mitochondrion | 79.83 | 78.19 |
CDY36283 | Canola | cytosol | 58.82 | 77.78 |
Os05t0323900-01 | Rice | mitochondrion | 72.69 | 74.89 |
EES17972 | Sorghum | mitochondrion | 73.11 | 74.68 |
TraesCS2B01G567600.1 | Wheat | mitochondrion | 70.59 | 74.67 |
Solyc06g049080.2.1 | Tomato | extracellular, nucleus, plastid | 71.01 | 74.12 |
Zm00001d037859_P002 | Maize | mitochondrion | 72.27 | 73.19 |
TraesCS2A01G537100.1 | Wheat | mitochondrion | 70.59 | 72.73 |
PGSC0003DMT400042937 | Potato | mitochondrion | 68.91 | 71.93 |
TraesCS2D01G538300.1 | Wheat | mitochondrion | 69.75 | 71.86 |
CDY00976 | Canola | mitochondrion | 69.75 | 71.86 |
Zm00001d009990_P001 | Maize | mitochondrion | 73.11 | 71.6 |
Bra034154.1-P | Field mustard | mitochondrion | 68.49 | 70.56 |
KRH64185 | Soybean | mitochondrion | 71.01 | 70.42 |
AT3G10920.1 | Thale cress | mitochondrion | 68.07 | 70.13 |
CDY08564 | Canola | mitochondrion | 67.65 | 69.7 |
CDY08566 | Canola | mitochondrion | 67.65 | 69.7 |
Bra029879.1-P | Field mustard | mitochondrion | 67.65 | 69.7 |
KRH53764 | Soybean | mitochondrion | 70.17 | 69.29 |
HORVU2Hr1G117740.2 | Barley | mitochondrion, plastid | 67.23 | 63.24 |
VIT_13s0067g02990.t01 | Wine grape | mitochondrion, plastid | 67.23 | 56.54 |
GSMUA_Achr10P... | Banana | vacuole | 24.79 | 26.22 |
GSMUA_Achr10P... | Banana | mitochondrion | 25.21 | 25.21 |
GSMUA_Achr11P... | Banana | plastid | 28.15 | 22.26 |
Protein Annotations
Gene3D:1.10.287.990 | MapMan:10.2.2.2 | Gene3D:2.40.500.20 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004784 |
GO:GO:0005488 | GO:GO:0006801 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
GO:GO:0016491 | GO:GO:0019430 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr8G21350_001 | EnsemblPlants:GSMUA_Achr8P21350_001 |
EnsemblPlants:GSMUA_Achr8T21350_001 | InterPro:IPR036314 | InterPro:IPR036324 | UniProt:M0TSD8 | InterPro:Mn/Fe_SOD | InterPro:Mn/Fe_SOD_BS |
InterPro:Mn/Fe_SOD_C | InterPro:Mn/Fe_SOD_N | InterPro:Mn/Fe_SOD_N_sf | PFAM:PF00081 | PFAM:PF02777 | PIRSF:PIRSF000349 |
PRINTS:PR01703 | ScanProsite:PS00088 | PANTHER:PTHR11404 | PANTHER:PTHR11404:SF6 | InterPro:SOD_C_sf | SUPFAM:SSF46609 |
SUPFAM:SSF54719 | UniParc:UPI000292D1EB | : | : | : | : |
Description
Superoxide dismutase [Mn] 3.1, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr8G21350_001]
Coordinates
chr8:-:26254629..26259642
Molecular Weight (calculated)
26288.3 Da
IEP (calculated)
7.659
GRAVY (calculated)
-0.216
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MALRTLFSKK AFTTASGFRP IAAGDRCFLR QARGLTVAAL PDLAYDYGAL EPAISGEIMR LHHQKHHQAY VTNYNNALEQ LETAVAKGDA SAVVRLQSAI
101: KFNGGGHINH SIFWKNLKPV NEGGGEPPHS TLGWAIDTDF CSLEALVQKM NAEGAALQGS GWVWLALDKG SKKLCVETTA NQDPLVTKGA NLVPLLGIDV
201: WEHAYYLQYK NVRPDYLKNI WKVINWKYAS EVFDEETA
101: KFNGGGHINH SIFWKNLKPV NEGGGEPPHS TLGWAIDTDF CSLEALVQKM NAEGAALQGS GWVWLALDKG SKKLCVETTA NQDPLVTKGA NLVPLLGIDV
201: WEHAYYLQYK NVRPDYLKNI WKVINWKYAS EVFDEETA
001: MAIRCVASRK TLAGLKETSS RLLRIRGIQT FTLPDLPYDY GALEPAISGE IMQIHHQKHH QAYVTNYNNA LEQLDQAVNK GDASTVVKLQ SAIKFNGGGH
101: VNHSIFWKNL APSSEGGGEP PKGSLGSAID AHFGSLEGLV KKMSAEGAAV QGSGWVWLGL DKELKKLVVD TTANQDPLVT KGGSLVPLVG IDVWEHAYYL
201: QYKNVRPEYL KNVWKVINWK YASEVYEKEN N
101: VNHSIFWKNL APSSEGGGEP PKGSLGSAID AHFGSLEGLV KKMSAEGAAV QGSGWVWLGL DKELKKLVVD TTANQDPLVT KGGSLVPLVG IDVWEHAYYL
201: QYKNVRPEYL KNVWKVINWK YASEVYEKEN N
Arabidopsis Description
MSD1Superoxide dismutase [Mn] 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O81235]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.