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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 7
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
 mitochondrion: 23895732
golgi: 25769308
mitochondrion: 26136264
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
msms PMID: 23895732 doi
RP Jacoby, AH Millar, NL Taylor
ARC Centre of Excellence in Plant Energy Biology & Centre for Comparative Analysis of Biomolecular Networks (CABiN), M316, The University of Western Australia , 35 Stirling Highway, Crawley, WA 6009, Australia.
msms PMID: 26136264 doi
S Wang, G Zhang, Y Zhang, Q Song, Z Chen, J Wang, J Guo, N Niu, J Wang, S Ma
College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China zhanggaisheng18@sohu.com., College of Agronomy, Northwest A&F University, National Yangling Agricultural Biotechnology & Breeding Center, Yangling Branch of State Wheat Improvement Centre, Wheat Breeding Engineering Research Center, Ministry of Education, Key Laboratory of Crop Heterosis of Shaanxi Province, Yangling, Shaanxi 712100, P. R. China., Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, P. R. China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G538300.1 Wheat mitochondrion 97.84 97.84
TraesCS2B01G567600.1 Wheat mitochondrion 91.34 93.78
EES17972 Sorghum mitochondrion 86.15 85.41
Zm00001d037859_P002 Maize mitochondrion 86.58 85.11
Os05t0323900-01 Rice mitochondrion 84.85 84.85
Zm00001d009990_P001 Maize mitochondrion 85.71 81.48
HORVU2Hr1G117740.2 Barley mitochondrion, plastid 89.18 81.42
CDY36283 Canola cytosol 61.04 78.33
Solyc06g049080.2.1 Tomato extracellular, nucleus, plastid 72.29 73.25
AT3G10920.1 Thale cress mitochondrion 73.16 73.16
PGSC0003DMT400042937 Potato mitochondrion 71.86 72.81
GSMUA_Achr3P09840_001 Banana mitochondrion 74.89 71.78
Bra034154.1-P Field mustard mitochondrion 71.43 71.43
GSMUA_Achr8P21350_001 Banana mitochondrion 72.73 70.59
Bra029879.1-P Field mustard mitochondrion 70.56 70.56
GSMUA_Achr2P18870_001 Banana mitochondrion, unclear 74.46 70.2
CDY08566 Canola mitochondrion 70.13 70.13
CDY08564 Canola mitochondrion 70.13 70.13
CDY00976 Canola mitochondrion 70.13 70.13
KRH64185 Soybean mitochondrion 72.73 70.0
KRH53764 Soybean mitochondrion 72.29 69.29
GSMUA_Achr3P18000_001 Banana mitochondrion 71.0 67.49
VIT_13s0067g02990.t01 Wine grape mitochondrion, plastid 66.67 54.42
TraesCS7A01G090400.1 Wheat mitochondrion, plastid 30.3 26.92
TraesCS4A01G390300.1 Wheat mitochondrion, plastid 29.87 26.44
TraesCS4A01G434000.1 Wheat plastid 31.17 18.41
TraesCS7A01G048600.1 Wheat mitochondrion 31.17 18.32
Protein Annotations
Gene3D:1.10.287.990MapMan:10.2.2.2Gene3D:2.40.500.20GO:GO:0000003GO:GO:0003674GO:GO:0003824
GO:GO:0004784GO:GO:0005488GO:GO:0005507GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005739GO:GO:0006801GO:GO:0006950GO:GO:0007275GO:GO:0008150
GO:GO:0008152GO:GO:0009605GO:GO:0009607GO:GO:0009628GO:GO:0009651GO:GO:0009790
GO:GO:0009791GO:GO:0009793GO:GO:0009987GO:GO:0010043GO:GO:0042742GO:GO:0046872
GO:GO:0055114InterPro:IPR036314InterPro:IPR036324InterPro:Mn/Fe_SODInterPro:Mn/Fe_SOD_BSInterPro:Mn/Fe_SOD_C
InterPro:Mn/Fe_SOD_NInterPro:Mn/Fe_SOD_N_sfPFAM:PF00081PFAM:PF02777PIRSF:PIRSF000349PRINTS:PR01703
ScanProsite:PS00088PANTHER:PTHR11404PANTHER:PTHR11404:SF6InterPro:SOD_C_sfSUPFAM:SSF46609SUPFAM:SSF54719
EnsemblPlantsGene:TraesCS2A01G537100EnsemblPlants:TraesCS2A01G537100.1SEG:seg:::
Description
No Description!
Coordinates
chr2A:-:751004614..751009403
Molecular Weight (calculated)
25300.3 Da
IEP (calculated)
8.678
GRAVY (calculated)
-0.245
Length
231 amino acids
Sequence
(BLAST)
001: MALRTLAAKK TLGLALGGAR PLAAARGVAT FTLPDLPYDF GALEPAVSGE IMRLHHQKHH ATYVANYNKA LEQLDAAVSK GDASAVVHLQ SAIKFNGGGH
101: VNHSIFWKNL KPISEGGGEP PHGKLGWAID EDFGSIEKLI KKMNAEGAAL QGSGWVWLAL DKEAKKLSVE TTPNQDPLVT KGSNLYPLLG IDVWEHAYYL
201: QYKNVRPDYL TNIWKVVNWK YAGEEYEKVL A
Best Arabidopsis Sequence Match ( AT3G10920.1 )
(BLAST)
001: MAIRCVASRK TLAGLKETSS RLLRIRGIQT FTLPDLPYDY GALEPAISGE IMQIHHQKHH QAYVTNYNNA LEQLDQAVNK GDASTVVKLQ SAIKFNGGGH
101: VNHSIFWKNL APSSEGGGEP PKGSLGSAID AHFGSLEGLV KKMSAEGAAV QGSGWVWLGL DKELKKLVVD TTANQDPLVT KGGSLVPLVG IDVWEHAYYL
201: QYKNVRPEYL KNVWKVINWK YASEVYEKEN N
Arabidopsis Description
MSD1Superoxide dismutase [Mn] 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O81235]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.