Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 8
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr10P... | |
| GSMUA_Achr10P... | |
| GSMUA_Achr11P... | |
| GSMUA_Achr3P22630_001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | vacuole | 89.5 | 94.67 |
| KXG19271 | Sorghum | plastid | 68.49 | 62.45 |
| TraesCS7A01G090400.1 | Wheat | mitochondrion, plastid | 67.23 | 61.54 |
| TraesCS4A01G390300.1 | Wheat | mitochondrion, plastid | 67.23 | 61.3 |
| Os06t0143000-01 | Rice | plastid | 65.55 | 61.18 |
| TraesCS7D01G086400.1 | Wheat | mitochondrion, plastid | 66.81 | 61.15 |
| Solyc02g021140.2.1 | Tomato | nucleus | 64.71 | 61.11 |
| CDX88013 | Canola | plastid | 67.65 | 60.98 |
| CDX87176 | Canola | plastid | 66.39 | 60.77 |
| Bra009670.1-P | Field mustard | plastid | 66.81 | 60.46 |
| Bra026503.1-P | Field mustard | plastid | 66.81 | 60.46 |
| CDY16845 | Canola | plastid | 66.81 | 60.46 |
| CDY45763 | Canola | plastid | 66.81 | 60.46 |
| Zm00001d025106_P003 | Maize | cytosol, mitochondrion, plastid | 47.06 | 60.22 |
| Zm00001d045384_P003 | Maize | mitochondrion | 50.84 | 60.2 |
| AT5G23310.1 | Thale cress | plastid | 66.39 | 60.08 |
| PGSC0003DMT400046236 | Potato | plastid | 62.18 | 57.36 |
| Zm00001d014632_P001 | Maize | mitochondrion | 36.55 | 56.49 |
| Zm00001d036135_P003 | Maize | mitochondrion, plastid | 63.87 | 53.52 |
| KRG89844 | Soybean | nucleus | 63.87 | 49.84 |
| VIT_10s0042g00100.t01 | Wine grape | mitochondrion | 66.81 | 49.53 |
| HORVU7Hr1G020590.12 | Barley | cytosol, plastid | 66.39 | 46.61 |
| GSMUA_Achr11P... | Banana | plastid | 39.08 | 30.9 |
| GSMUA_Achr3P09840_001 | Banana | mitochondrion | 26.05 | 25.73 |
| GSMUA_Achr8P21350_001 | Banana | mitochondrion | 25.21 | 25.21 |
| GSMUA_Achr2P18870_001 | Banana | mitochondrion, unclear | 25.63 | 24.9 |
| GSMUA_Achr3P18000_001 | Banana | mitochondrion | 25.21 | 24.69 |
Protein Annotations
| Gene3D:1.10.287.990 | MapMan:10.2.2.1 | MapMan:15.6.1.2.2.4 | Gene3D:2.40.500.20 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004784 | GO:GO:0005488 | GO:GO:0006801 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016491 | GO:GO:0019430 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr10G27220_001 |
| EnsemblPlants:GSMUA_Achr10P27220_001 | EnsemblPlants:GSMUA_Achr10T27220_001 | InterPro:IPR036314 | InterPro:IPR036324 | UniProt:M0RLU6 | InterPro:Mn/Fe_SOD |
| InterPro:Mn/Fe_SOD_BS | InterPro:Mn/Fe_SOD_C | InterPro:Mn/Fe_SOD_N | InterPro:Mn/Fe_SOD_N_sf | PFAM:PF00081 | PFAM:PF02777 |
| PIRSF:PIRSF000349 | PRINTS:PR01703 | ScanProsite:PS00088 | PANTHER:PTHR42769 | PANTHER:PTHR42769:SF7 | InterPro:SOD_C_sf |
| SUPFAM:SSF46609 | SUPFAM:SSF54719 | UniParc:UPI0002960F7F | : | : | : |
Description
Superoxide dismutase [Fe], chloroplastic (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr10G27220_001]
Coordinates
chr10:+:30446971..30449330
Molecular Weight (calculated)
27734.2 Da
IEP (calculated)
7.269
GRAVY (calculated)
-0.315
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MFVRLTPVHK KQIYQFRKVT KVLAYYGLTN PPYKLDALEP YMSRRTLELH WGNIHRGYVD SLNKQLANSP LYGCTMEELI KTTFNNGNPL PEYNNAAEVW
101: NHDFFWESMQ PNGGRLPWGG VLDQIEKDFG SFSNFRDEFV HSAMMLFGSG WVWLVLKTNE RRLSIVRTSN ALCPLVWGDI PIISLDMWEH AYYLDYKDDV
201: SKYVNNFMDH LISWHSATAR MVRTEAFVNL GEPKIPVA
101: NHDFFWESMQ PNGGRLPWGG VLDQIEKDFG SFSNFRDEFV HSAMMLFGSG WVWLVLKTNE RRLSIVRTSN ALCPLVWGDI PIISLDMWEH AYYLDYKDDV
201: SKYVNNFMDH LISWHSATAR MVRTEAFVNL GEPKIPVA
001: MSSCVVTTSC FYTISDSSIR LKSPKLLNLS NQQRRRSLRS RGGLKVEAYY GLKTPPYPLD ALEPYMSRRT LEVHWGKHHR GYVDNLNKQL GKDDRLYGYT
101: MEELIKATYN NGNPLPEFNN AAQVYNHDFF WESMQPGGGD TPQKGVLEQI DKDFGSFTNF REKFTNAALT QFGSGWVWLV LKREERRLEV VKTSNAINPL
201: VWDDIPIICV DVWEHSYYLD YKNDRAKYIN TFLNHLVSWN AAMSRMARAE AFVNLGEPNI PIA
101: MEELIKATYN NGNPLPEFNN AAQVYNHDFF WESMQPGGGD TPQKGVLEQI DKDFGSFTNF REKFTNAALT QFGSGWVWLV LKREERRLEV VKTSNAINPL
201: VWDDIPIICV DVWEHSYYLD YKNDRAKYIN TFLNHLVSWN AAMSRMARAE AFVNLGEPNI PIA
Arabidopsis Description
FSD3Superoxide dismutase [Fe] 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FMX0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.