Factsheet for HORVU1Hr1G007300.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

mitochondrion 2
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G081910.1	Barley	mitochondrion	61.4	70.0
HORVU4Hr1G080860.1	Barley	mitochondrion	62.28	69.95
HORVU3Hr1G094600.2	Barley	plastid	65.79	36.32
KRG97416	Soybean	nucleus	46.49	30.46
CDY12640	Canola	nucleus, plastid	45.18	29.86
KRH31482	Soybean	mitochondrion	47.37	29.83
CDX91552	Canola	cytosol, nucleus, plastid	35.96	29.29
CDY16365	Canola	cytosol, nucleus, plastid	39.47	29.22
HORVU2Hr1G069440.2	Barley	nucleus	48.68	28.98
PGSC0003DMT400074839	Potato	nucleus	46.49	28.27
CDY51342	Canola	nucleus	42.54	28.2
CDY28891	Canola	mitochondrion, plastid	45.61	28.18
GSMUA_Achr5P25110_001	Banana	nucleus	45.61	28.11
Solyc05g015420.2.1	Tomato	mitochondrion	47.37	27.98
KRH63766	Soybean	cytosol, nucleus, plastid	42.11	27.91
CDY07427	Canola	mitochondrion	44.74	27.79
VIT_01s0010g03630.t01	Wine grape	nucleus	46.93	27.79
CDY70354	Canola	cytosol	45.18	27.69
Bra004220.1-P	Field mustard	nucleus	45.18	27.69
KRH54183	Soybean	cytosol, nucleus, plastid	42.11	27.59
CDY01803	Canola	mitochondrion, plastid	45.18	27.54
Bra004092.1-P	Field mustard	mitochondrion	44.3	27.52
AT1G67340.1	Thale cress	mitochondrion, plastid	45.18	27.18
Bra022516.1-P	Field mustard	cytosol	39.47	27.11
Bra034004.1-P	Field mustard	nucleus, plastid	44.3	26.79
GSMUA_Achr11P...	Banana	nucleus	41.67	26.76
AT5G50450.1	Thale cress	cytosol, nucleus, plastid	39.04	26.49
KRH42672	Soybean	mitochondrion	43.42	25.32
KRH58771	Soybean	mitochondrion	42.98	24.87
GSMUA_Achr8P00700_001	Banana	plastid	44.74	23.34

Protein Annotations

EnsemblPlants:HORVU1Hr1G007300.2	EnsemblPlantsGene:HORVU1Hr1G007300	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:IPR011990	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR12298	PANTHER:PTHR12298:SF29	SEG:seg
SUPFAM:SSF81383	SUPFAM:SSF81901	UniParc:UPI000B46B1D3	UniProt:A0A287EJT5	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr1H:-:14343818..14344879

Molecular Weight (calculated)

24129.3 Da

IEP (calculated)

10.530

GRAVY (calculated)

-0.037

Length

228 amino acids

Sequence
(BLAST)

001: ARYGKDRRVQ RLAASARKDA RALAMAMLHM RAPEAPGRGP DYLDGIPDDL VLSIFSKLAA SGTSPSDLLS VYLTCKRLNG LGQQDMVFAK ASPASLAAWS
101: EPVQRFLKRC ADAGNLEACY ILGMIRFYCL GSRSGGPALL AKAAVGGHPA ALYSLAVIQF NGSGGAKSDR DLRAGASLWP LASGFGRWNA CMAPKCLASH
201: VQRPRLRRHT AGVGPAAPAW PFCATSKA

Best Arabidopsis Sequence Match ( AT1G67340.1 )
(BLAST)

001: MLPSRKTKRV FSCDFTPGRK RRRCVVVPSS VSPVPENTTG ADLLDSIPDD LVISILCKLG STSRCPADFI NVLLTCKRLK GLAMNPIVLS RLSPKAIAVK
101: AHNWSEYSHR FLKRCVDAGS LEACYTLGMI RFYCLQNRGN GASLMAKAAI SSHAPALYSL AVIQFNGSGG SKNDKDLRAG VALCARAAFL GHVDALRELG
201: HCLQDGYGVP QNVSEGRRFL VQANARELAA VLSSGIQARS TWLSLSQPPP PVVPNHGQQT CPLLSDFGCN VPAPETHPAN RFLADWFAVR GGDCPGDGLR
301: LCSHAGCGRP ETRKHEFRRC SVCGVVNYCS RACQALDWKL RHKMDCAPVQ RWLEEGDGGE GNVQIDGNGN GDNVLLPMS

Arabidopsis Description

F-box protein At1g67340 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYF9]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.