Factsheet for GSMUA_Achr8P00700_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P25110_001	Banana	nucleus	55.61	65.68
GSMUA_Achr9P29380_001	Banana	mitochondrion	47.37	62.73
GSMUA_Achr9P01480_001	Banana	nucleus	49.2	62.14
GSMUA_Achr11P...	Banana	nucleus	49.89	61.41
GSMUA_Achr6P06430_001	Banana	cytosol, mitochondrion, nucleus, plastid	48.74	60.51
GSMUA_Achr8P17530_001	Banana	mitochondrion	48.28	59.1
CDY16365	Canola	cytosol, nucleus, plastid	40.96	58.12
KRG97416	Soybean	nucleus	46.0	57.76
CDX91552	Canola	cytosol, nucleus, plastid	36.61	57.14
Bra022516.1-P	Field mustard	cytosol	43.02	56.63
KRH31482	Soybean	mitochondrion	46.45	56.08
AT5G50450.1	Thale cress	cytosol, nucleus, plastid	42.33	55.06
CDY70354	Canola	cytosol	46.22	54.3
Bra004220.1-P	Field mustard	nucleus	46.22	54.3
VIT_01s0010g03630.t01	Wine grape	nucleus	47.6	54.03
CDY01803	Canola	mitochondrion, plastid	46.22	54.01
CDY12640	Canola	nucleus, plastid	42.56	53.91
PGSC0003DMT400074839	Potato	nucleus	45.77	53.33
KRH63766	Soybean	cytosol, nucleus, plastid	41.88	53.2
Solyc05g015420.2.1	Tomato	mitochondrion	46.91	53.11
CDY07427	Canola	mitochondrion	44.39	52.86
Bra004092.1-P	Field mustard	mitochondrion	44.16	52.59
KRH54183	Soybean	cytosol, nucleus, plastid	41.88	52.59
Zm00001d025218_P001	Maize	nucleus	44.85	52.55
TraesCS2B01G299700.1	Wheat	nucleus	46.22	52.47
CDY51342	Canola	nucleus	41.19	52.33
CDY28891	Canola	mitochondrion, plastid	44.16	52.3
AT1G67340.1	Thale cress	mitochondrion, plastid	45.31	52.24
HORVU2Hr1G069440.2	Barley	nucleus	45.31	51.7
Bra034004.1-P	Field mustard	nucleus, plastid	44.16	51.19
KRH42672	Soybean	mitochondrion	45.54	50.9
KRH58771	Soybean	mitochondrion	45.54	50.51
Os04t0385600-01	Rice	nucleus	45.54	50.38
Zm00001d003993_P001	Maize	mitochondrion, nucleus	45.77	50.38
Os01t0921800-00	Rice	cytosol, mitochondrion, nucleus, plastid	44.62	50.26
TraesCS3B01G467900.1	Wheat	nucleus	43.48	49.61
Zm00001d042328_P001	Maize	nucleus	44.16	49.49
OQU81347	Sorghum	mitochondrion, nucleus	46.22	49.15
TraesCS3A01G429900.1	Wheat	nucleus	43.02	49.09
TraesCS3D01G425300.1	Wheat	nucleus	43.02	48.96
TraesCS3B01G468000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	41.65	48.53
TraesCS2A01G282300.1	Wheat	nucleus	46.45	48.33
KXG34006	Sorghum	nucleus	43.48	48.22
Zm00001d012016_P001	Maize	nucleus	42.11	48.17
TraesCS2D01G281100.1	Wheat	nucleus	46.22	48.1
Zm00001d049186_P001	Maize	mitochondrion	35.93	47.87
EES09728	Sorghum	cytosol, nucleus, plastid	36.38	47.46
HORVU3Hr1G094600.2	Barley	plastid	43.25	45.76
GSMUA_Achr9P07210_001	Banana	nucleus	31.81	45.57
Os11t0488900-00	Rice	mitochondrion	37.3	45.53
HORVU1Hr1G007300.2	Barley	cytosol, mitochondrion, peroxisome	23.34	44.74
HORVU2Hr1G081910.1	Barley	mitochondrion	20.37	44.5
HORVU4Hr1G080860.1	Barley	mitochondrion	20.59	44.34
Os02t0506400-00	Rice	cytosol, mitochondrion, nucleus	37.99	43.8
Os05t0388151-00	Rice	nucleus	13.73	31.91
Zm00001d016505_P001	Maize	mitochondrion	27.0	31.3
KXG30224	Sorghum	mitochondrion	21.74	30.84

Protein Annotations

Gene3D:1.25.40.10	Gene3D:3.30.60.180	MapMan:35.1	InterPro:F-box-like_dom_sf	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr8G00700_001	EnsemblPlants:GSMUA_Achr8P00700_001	EnsemblPlants:GSMUA_Achr8T00700_001	InterPro:IPR002893	InterPro:IPR011990
UniProt:M0TLH2	PFAM:PF01753	PFscan:PS50865	PANTHER:PTHR12298	PANTHER:PTHR12298:SF37	SUPFAM:SSF144232
SUPFAM:SSF81383	SUPFAM:SSF81901	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000294A891	InterPro:Znf_MYND	SEG:seg

Description

F-box protein At1g67340 [Source:GMGC_GENE;Acc:GSMUA_Achr8G00700_001]

Coordinates

chr8:+:636470..638439

Molecular Weight (calculated)

47401.4 Da

IEP (calculated)

9.406

GRAVY (calculated)

-0.300

Length

437 amino acids

Sequence
(BLAST)

001: MNTRRASQCL GPPTQINDHA ACRKPCKRRR GPPTLSQGLE PCARKRPWSS AVPAPAATEE ESVDYFDGLP DDIVVSVLSE LSSSADRPSD LISALLTCKR
101: FHVLGHRPLV LSKAGASCIA VRAKSWCDSA HRFLKRCVDC GNLEASYVLG MIRFYALENR GSGAALMARA AIGSHAAALY SLAIIQFNGS GGSKTDKDLR
201: AGAALCARAA FLGHVDALRE IGHCLQDGYG VRRNVTEGRR FLIQANAREL AAAVSLPAPE PHPANQFLAE WFGASAGAAG EGLRLCSHRG CGRPETRRHE
301: FRRCSVCGLV NYCSRACQAL DWKLSHKAKC NPTDGWAAVK ETVELQGIQS WKRDQHPILP QPTNLFFLLS FSYRGYYCWW SKERKTKKQK VGFGSQPAQK
401: ANPTSPWSFL ILSLSEFSST KGSASGSGDA SSTCGAQ

Best Arabidopsis Sequence Match ( AT1G67340.1 )
(BLAST)

001: MLPSRKTKRV FSCDFTPGRK RRRCVVVPSS VSPVPENTTG ADLLDSIPDD LVISILCKLG STSRCPADFI NVLLTCKRLK GLAMNPIVLS RLSPKAIAVK
101: AHNWSEYSHR FLKRCVDAGS LEACYTLGMI RFYCLQNRGN GASLMAKAAI SSHAPALYSL AVIQFNGSGG SKNDKDLRAG VALCARAAFL GHVDALRELG
201: HCLQDGYGVP QNVSEGRRFL VQANARELAA VLSSGIQARS TWLSLSQPPP PVVPNHGQQT CPLLSDFGCN VPAPETHPAN RFLADWFAVR GGDCPGDGLR
301: LCSHAGCGRP ETRKHEFRRC SVCGVVNYCS RACQALDWKL RHKMDCAPVQ RWLEEGDGGE GNVQIDGNGN GDNVLLPMS

Arabidopsis Description

F-box protein At1g67340 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYF9]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.