Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G425300.1 | Wheat | nucleus | 83.54 | 89.84 |
| TraesCS3A01G429900.1 | Wheat | nucleus | 83.29 | 89.82 |
| TraesCS3B01G467900.1 | Wheat | nucleus | 82.08 | 88.51 |
| TraesCS3B01G468000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 78.93 | 86.93 |
| Os01t0921800-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 72.64 | 77.32 |
| Zm00001d042328_P001 | Maize | nucleus | 70.22 | 74.36 |
| KXG34006 | Sorghum | nucleus | 69.98 | 73.35 |
| Zm00001d012016_P001 | Maize | nucleus | 67.8 | 73.3 |
| HORVU4Hr1G080860.1 | Barley | mitochondrion | 34.62 | 70.44 |
| HORVU2Hr1G081910.1 | Barley | mitochondrion | 33.9 | 70.0 |
| HORVU1Hr1G007300.2 | Barley | cytosol, mitochondrion, peroxisome | 36.32 | 65.79 |
| CDX91552 | Canola | cytosol, nucleus, plastid | 38.5 | 56.79 |
| KRG97416 | Soybean | nucleus | 46.49 | 55.17 |
| CDY16365 | Canola | cytosol, nucleus, plastid | 40.92 | 54.87 |
| HORVU2Hr1G069440.2 | Barley | nucleus | 50.85 | 54.83 |
| VIT_01s0010g03630.t01 | Wine grape | nucleus | 50.36 | 54.03 |
| KRH31482 | Soybean | mitochondrion | 47.22 | 53.87 |
| Solyc05g015420.2.1 | Tomato | mitochondrion | 49.88 | 53.37 |
| CDY12640 | Canola | nucleus, plastid | 44.55 | 53.33 |
| PGSC0003DMT400074839 | Potato | nucleus | 48.18 | 53.07 |
| GSMUA_Achr5P25110_001 | Banana | nucleus | 47.46 | 52.97 |
| Bra022516.1-P | Field mustard | cytosol | 42.37 | 52.71 |
| CDY28891 | Canola | mitochondrion, plastid | 46.97 | 52.57 |
| CDY07427 | Canola | mitochondrion | 46.49 | 52.32 |
| GSMUA_Achr11P... | Banana | nucleus | 44.79 | 52.11 |
| Bra004092.1-P | Field mustard | mitochondrion | 46.25 | 52.04 |
| CDY51342 | Canola | nucleus | 43.1 | 51.74 |
| AT5G50450.1 | Thale cress | cytosol, nucleus, plastid | 41.89 | 51.49 |
| Bra034004.1-P | Field mustard | nucleus, plastid | 46.97 | 51.46 |
| AT1G67340.1 | Thale cress | mitochondrion, plastid | 47.22 | 51.45 |
| CDY01803 | Canola | mitochondrion, plastid | 46.49 | 51.34 |
| Bra004220.1-P | Field mustard | nucleus | 46.0 | 51.08 |
| CDY70354 | Canola | cytosol | 46.0 | 51.08 |
| KRH42672 | Soybean | mitochondrion | 47.46 | 50.13 |
| KRH58771 | Soybean | mitochondrion | 47.22 | 49.49 |
| KRH54183 | Soybean | cytosol, nucleus, plastid | 41.4 | 49.14 |
| KRH63766 | Soybean | cytosol, nucleus, plastid | 40.92 | 49.13 |
| GSMUA_Achr8P00700_001 | Banana | plastid | 45.76 | 43.25 |
Protein Annotations
| Gene3D:1.25.40.10 | Gene3D:3.30.60.180 | MapMan:35.1 | UniProt:A0A287MD39 | InterPro:F-box-like_dom_sf | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:HORVU3Hr1G094600 | EnsemblPlants:HORVU3Hr1G094600.2 | InterPro:IPR002893 | InterPro:IPR011990 |
| PFAM:PF01753 | PFscan:PS50865 | PANTHER:PTHR12298 | PANTHER:PTHR12298:SF29 | SUPFAM:SSF144232 | SUPFAM:SSF81383 |
| SUPFAM:SSF81901 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI000B46FBEB | InterPro:Znf_MYND | SEG:seg | : |
Description
No Description!
Coordinates
chrchr3H:+:646605359..646607159
Molecular Weight (calculated)
43064.3 Da
IEP (calculated)
9.153
GRAVY (calculated)
-0.138
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: HLISSHLSSL HSTAPLLPSP GEERSAATAR PARHNMRTRS GSLYPCDPAA PVAGQKRKRS PSAAADDGCR KRLAGGPDYL DGIPDDLVLS IFSKLAASAS
101: SPSDLLSVHL TCKRLNGLGQ QDMVFAKASP ASLAVKAAAW SEPVQRFLKR CADAGNLEAC YILGMIRFYC LGSRSGGAAL LAKAAVGGHP AALYSLAVIQ
201: FNGSGGAKSD RDLRAGAALC ARSAALGHVD ALRELGHCLQ DGYGVRRDPA EGRRLLVAAN ARELSLALAA AAASAAYPFA SLPIGAVAGG GGVSTSPLLS
301: DFGWSLPEAE PHTANQFMSD WWAARGVQAC AKKPDAAATG GDGGEGELRL CSHMRCGRKE TRRHEFRRCS VCGAANYCSR ACQALDWKRA HKAQCVPMDR
401: WLVGAAGAAA PQQ
101: SPSDLLSVHL TCKRLNGLGQ QDMVFAKASP ASLAVKAAAW SEPVQRFLKR CADAGNLEAC YILGMIRFYC LGSRSGGAAL LAKAAVGGHP AALYSLAVIQ
201: FNGSGGAKSD RDLRAGAALC ARSAALGHVD ALRELGHCLQ DGYGVRRDPA EGRRLLVAAN ARELSLALAA AAASAAYPFA SLPIGAVAGG GGVSTSPLLS
301: DFGWSLPEAE PHTANQFMSD WWAARGVQAC AKKPDAAATG GDGGEGELRL CSHMRCGRKE TRRHEFRRCS VCGAANYCSR ACQALDWKRA HKAQCVPMDR
401: WLVGAAGAAA PQQ
001: MLPSRKTKRV FSCDFTPGRK RRRCVVVPSS VSPVPENTTG ADLLDSIPDD LVISILCKLG STSRCPADFI NVLLTCKRLK GLAMNPIVLS RLSPKAIAVK
101: AHNWSEYSHR FLKRCVDAGS LEACYTLGMI RFYCLQNRGN GASLMAKAAI SSHAPALYSL AVIQFNGSGG SKNDKDLRAG VALCARAAFL GHVDALRELG
201: HCLQDGYGVP QNVSEGRRFL VQANARELAA VLSSGIQARS TWLSLSQPPP PVVPNHGQQT CPLLSDFGCN VPAPETHPAN RFLADWFAVR GGDCPGDGLR
301: LCSHAGCGRP ETRKHEFRRC SVCGVVNYCS RACQALDWKL RHKMDCAPVQ RWLEEGDGGE GNVQIDGNGN GDNVLLPMS
101: AHNWSEYSHR FLKRCVDAGS LEACYTLGMI RFYCLQNRGN GASLMAKAAI SSHAPALYSL AVIQFNGSGG SKNDKDLRAG VALCARAAFL GHVDALRELG
201: HCLQDGYGVP QNVSEGRRFL VQANARELAA VLSSGIQARS TWLSLSQPPP PVVPNHGQQT CPLLSDFGCN VPAPETHPAN RFLADWFAVR GGDCPGDGLR
301: LCSHAGCGRP ETRKHEFRRC SVCGVVNYCS RACQALDWKL RHKMDCAPVQ RWLEEGDGGE GNVQIDGNGN GDNVLLPMS
Arabidopsis Description
F-box protein At1g67340 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYF9]
SUBAcon: [plastid,mitochondrion]
SUBAcon: [plastid,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.