Factsheet for HORVU4Hr1G080860.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G081910.1	Barley	mitochondrion	87.68	89.0
HORVU1Hr1G007300.2	Barley	cytosol, mitochondrion, peroxisome	69.95	62.28
HORVU3Hr1G094600.2	Barley	plastid	70.44	34.62
CDY12640	Canola	nucleus, plastid	44.83	26.38
KRG97416	Soybean	nucleus	44.83	26.15
CDY16365	Canola	cytosol, nucleus, plastid	39.41	25.97
CDX91552	Canola	cytosol, nucleus, plastid	35.47	25.71
KRH31482	Soybean	mitochondrion	45.81	25.69
GSMUA_Achr11P...	Banana	nucleus	44.34	25.35
GSMUA_Achr5P25110_001	Banana	nucleus	45.81	25.14
HORVU2Hr1G069440.2	Barley	nucleus	47.29	25.07
PGSC0003DMT400074839	Potato	nucleus	45.81	24.8
CDY07427	Canola	mitochondrion	44.83	24.8
CDY51342	Canola	nucleus	41.87	24.71
VIT_01s0010g03630.t01	Wine grape	nucleus	46.8	24.68
CDY28891	Canola	mitochondrion, plastid	44.83	24.66
Solyc05g015420.2.1	Tomato	mitochondrion	46.8	24.61
Bra004092.1-P	Field mustard	mitochondrion	44.34	24.52
CDY70354	Canola	cytosol	44.34	24.19
Bra004220.1-P	Field mustard	nucleus	44.34	24.19
Bra022516.1-P	Field mustard	cytosol	39.41	24.1
CDY01803	Canola	mitochondrion, plastid	44.34	24.06
AT5G50450.1	Thale cress	cytosol, nucleus, plastid	39.41	23.81
AT1G67340.1	Thale cress	mitochondrion, plastid	44.34	23.75
KRH54183	Soybean	cytosol, nucleus, plastid	40.39	23.56
KRH63766	Soybean	cytosol, nucleus, plastid	39.9	23.55
Bra034004.1-P	Field mustard	nucleus, plastid	43.35	23.34
KRH42672	Soybean	mitochondrion	43.84	22.76
KRH58771	Soybean	mitochondrion	42.86	22.08
GSMUA_Achr8P00700_001	Banana	plastid	44.34	20.59

Protein Annotations

EnsemblPlants:HORVU4Hr1G080860.1	EnsemblPlantsGene:HORVU4Hr1G080860	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:F-box-like_dom_sf	InterPro:IPR011990	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR12298	PANTHER:PTHR12298:SF29	SEG:seg
SUPFAM:SSF81383	SUPFAM:SSF81901	UniParc:UPI000B46AB30	UniProt:A0A287PU62	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr4H:+:617435673..617436775

Molecular Weight (calculated)

21576.3 Da

IEP (calculated)

10.022

GRAVY (calculated)

0.080

Length

203 amino acids

Sequence
(BLAST)

001: CLAVLRLLHA RHARYGKDRR VQQLAASARK DARAPAMAMP HMRAPEAPGR GPDYLDGIPD DLVLSIFSKL AASATSPSDL LSVYLTCKRL NGLGQQDMVF
101: AKASPASLAA WSEPVQRFLK RCADAGNLEA CYILSMIRFY CLGSRSGGAA LLAKAAVGGH PAALYSLAVI QFNGSGGAKS DRDLRVGASL CIEVKFVNFA
201: PAK

Best Arabidopsis Sequence Match ( AT1G67340.1 )
(BLAST)

001: MLPSRKTKRV FSCDFTPGRK RRRCVVVPSS VSPVPENTTG ADLLDSIPDD LVISILCKLG STSRCPADFI NVLLTCKRLK GLAMNPIVLS RLSPKAIAVK
101: AHNWSEYSHR FLKRCVDAGS LEACYTLGMI RFYCLQNRGN GASLMAKAAI SSHAPALYSL AVIQFNGSGG SKNDKDLRAG VALCARAAFL GHVDALRELG
201: HCLQDGYGVP QNVSEGRRFL VQANARELAA VLSSGIQARS TWLSLSQPPP PVVPNHGQQT CPLLSDFGCN VPAPETHPAN RFLADWFAVR GGDCPGDGLR
301: LCSHAGCGRP ETRKHEFRRC SVCGVVNYCS RACQALDWKL RHKMDCAPVQ RWLEEGDGGE GNVQIDGNGN GDNVLLPMS

Arabidopsis Description

F-box protein At1g67340 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYF9]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.