CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97416	Soybean	nucleus	87.29	90.8
KRH42672	Soybean	mitochondrion	75.14	69.57
KRH58771	Soybean	mitochondrion	73.76	67.77
VIT_01s0010g03630.t01	Wine grape	nucleus	70.72	66.49
KRH63766	Soybean	cytosol, nucleus, plastid	61.05	64.24
GSMUA_Achr9P29380_001	Banana	mitochondrion	58.29	63.94
GSMUA_Achr8P17530_001	Banana	mitochondrion	62.43	63.31
GSMUA_Achr9P01480_001	Banana	nucleus	59.12	61.85
KRH54183	Soybean	cytosol, nucleus, plastid	59.39	61.78
GSMUA_Achr6P06430_001	Banana	cytosol, mitochondrion, nucleus, plastid	59.67	61.36
GSMUA_Achr5P25110_001	Banana	nucleus	58.84	57.57
GSMUA_Achr11P...	Banana	nucleus	54.42	55.49
Os01t0921800-00	Rice	cytosol, mitochondrion, nucleus, plastid	56.08	52.32
HORVU2Hr1G069440.2	Barley	nucleus	54.97	51.96
Zm00001d025218_P001	Maize	nucleus	53.31	51.74
Zm00001d012016_P001	Maize	nucleus	54.42	51.57
TraesCS2B01G299700.1	Wheat	nucleus	54.7	51.43
TraesCS3B01G467900.1	Wheat	nucleus	54.14	51.17
Zm00001d042328_P001	Maize	nucleus	54.97	51.03
KXG34006	Sorghum	nucleus	55.52	51.02
TraesCS3D01G425300.1	Wheat	nucleus	53.87	50.78
TraesCS3A01G429900.1	Wheat	nucleus	53.59	50.65
TraesCS3B01G468000.1	Wheat	cytosol, mitochondrion, nucleus, plastid	51.93	50.13
Os04t0385600-01	Rice	nucleus	54.7	50.13
Zm00001d003993_P001	Maize	mitochondrion, nucleus	53.59	48.87
OQU81347	Sorghum	mitochondrion, nucleus	54.7	48.18
Zm00001d049186_P001	Maize	mitochondrion	43.09	47.56
TraesCS2D01G281100.1	Wheat	nucleus	54.97	47.38
HORVU1Hr1G007300.2	Barley	cytosol, mitochondrion, peroxisome	29.83	47.37
HORVU3Hr1G094600.2	Barley	plastid	53.87	47.22
TraesCS2A01G282300.1	Wheat	nucleus	54.7	47.14
GSMUA_Achr9P07210_001	Banana	nucleus	39.5	46.89
GSMUA_Achr8P00700_001	Banana	plastid	56.08	46.45
EES09728	Sorghum	cytosol, nucleus, plastid	42.82	46.27
HORVU4Hr1G080860.1	Barley	mitochondrion	25.69	45.81
Os11t0488900-00	Rice	mitochondrion	45.3	45.81
HORVU2Hr1G081910.1	Barley	mitochondrion	25.14	45.5
Os02t0506400-00	Rice	cytosol, mitochondrion, nucleus	44.75	42.74
Zm00001d016505_P001	Maize	mitochondrion	34.53	33.16
KXG30224	Sorghum	mitochondrion	27.35	32.14
Os05t0388151-00	Rice	nucleus	14.64	28.19

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100798136	Gene3D:3.30.60.180	MapMan:35.1	UniProt:A0A0R0HLZ8	EMBL:ACUP02007145
InterPro:F-box-like_dom_sf	EnsemblPlantsGene:GLYMA_11G250600	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR002893
InterPro:IPR011990	EnsemblPlants:KRH31482	ProteinID:KRH31482	ProteinID:KRH31482.1	ProteinID:KRH31483.1	PFAM:PF01753
PFscan:PS50865	PANTHER:PTHR12298	PANTHER:PTHR12298:SF37	SUPFAM:SSF144232	SUPFAM:SSF81383	SUPFAM:SSF81901
InterPro:TPR-like_helical_dom_sf	UniParc:UPI0001B637C6	InterPro:Znf_MYND	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr11:-:34223019..34225035

Molecular Weight (calculated)

39851.5 Da

IEP (calculated)

8.412

GRAVY (calculated)

-0.319

Length

362 amino acids

Sequence
(BLAST)

001: MRTRRRLSYL PTMSCRKRQK TSPDKTSDCF DSLPDDLVLS ILCKLSSTAT SPSDFISVLI TCKRLNSLGL HSLVLSKASH KTFSVKAKNW CDSLHRFLKH
101: CADAGNIEAC YTLGLIRFYC LQNRGSGAAL MAKAAMNSHA PALYSLAVIQ FNGSGGTKND KDLRAGVALC ARAAFLGHID ALRELGHCLQ DGYGVKQNVT
201: EGRRFLVQAN VRELAAVLSA GNNKRPWLTW SHQPVPHPRL RSETGSGCPL LSDYGCNVPA PEVHPASQFM SEWFDIRGGF PSAGMRLCSQ SGCGRPETRR
301: HEFRRCSVCG VVNYCSRACQ ALDWKFRHKA ECAPVERWLD DDDEDVAGEN DGGDDGVMMV DS

Best Arabidopsis Sequence Match ( AT1G67340.1 )
(BLAST)

001: MLPSRKTKRV FSCDFTPGRK RRRCVVVPSS VSPVPENTTG ADLLDSIPDD LVISILCKLG STSRCPADFI NVLLTCKRLK GLAMNPIVLS RLSPKAIAVK
101: AHNWSEYSHR FLKRCVDAGS LEACYTLGMI RFYCLQNRGN GASLMAKAAI SSHAPALYSL AVIQFNGSGG SKNDKDLRAG VALCARAAFL GHVDALRELG
201: HCLQDGYGVP QNVSEGRRFL VQANARELAA VLSSGIQARS TWLSLSQPPP PVVPNHGQQT CPLLSDFGCN VPAPETHPAN RFLADWFAVR GGDCPGDGLR
301: LCSHAGCGRP ETRKHEFRRC SVCGVVNYCS RACQALDWKL RHKMDCAPVQ RWLEEGDGGE GNVQIDGNGN GDNVLLPMS

Arabidopsis Description

F-box protein At1g67340 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYF9]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.