Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- vacuole 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31482 | Soybean | mitochondrion | 90.8 | 87.29 |
| KRH42672 | Soybean | mitochondrion | 76.15 | 67.77 |
| VIT_01s0010g03630.t01 | Wine grape | nucleus | 73.28 | 66.23 |
| KRH58771 | Soybean | mitochondrion | 74.43 | 65.74 |
| GSMUA_Achr8P17530_001 | Banana | mitochondrion | 65.52 | 63.87 |
| KRH63766 | Soybean | cytosol, nucleus, plastid | 62.64 | 63.37 |
| GSMUA_Achr9P29380_001 | Banana | mitochondrion | 59.48 | 62.73 |
| GSMUA_Achr6P06430_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 62.36 | 61.65 |
| KRH54183 | Soybean | cytosol, nucleus, plastid | 61.21 | 61.21 |
| GSMUA_Achr9P01480_001 | Banana | nucleus | 60.63 | 60.98 |
| GSMUA_Achr5P25110_001 | Banana | nucleus | 60.34 | 56.76 |
| GSMUA_Achr11P... | Banana | nucleus | 56.03 | 54.93 |
| Os01t0921800-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 56.61 | 50.77 |
| Zm00001d025218_P001 | Maize | nucleus | 54.31 | 50.67 |
| Zm00001d012016_P001 | Maize | nucleus | 55.17 | 50.26 |
| Zm00001d042328_P001 | Maize | nucleus | 56.32 | 50.26 |
| TraesCS3B01G467900.1 | Wheat | nucleus | 55.17 | 50.13 |
| HORVU2Hr1G069440.2 | Barley | nucleus | 55.17 | 50.13 |
| TraesCS2B01G299700.1 | Wheat | nucleus | 55.46 | 50.13 |
| KXG34006 | Sorghum | nucleus | 56.61 | 50.0 |
| TraesCS3A01G429900.1 | Wheat | nucleus | 54.89 | 49.87 |
| TraesCS3D01G425300.1 | Wheat | nucleus | 54.6 | 49.48 |
| TraesCS3B01G468000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 52.59 | 48.8 |
| Zm00001d003993_P001 | Maize | mitochondrion, nucleus | 54.89 | 48.11 |
| Os04t0385600-01 | Rice | nucleus | 54.6 | 48.1 |
| OQU81347 | Sorghum | mitochondrion, nucleus | 55.46 | 46.96 |
| Zm00001d049186_P001 | Maize | mitochondrion | 44.25 | 46.95 |
| EES09728 | Sorghum | cytosol, nucleus, plastid | 45.11 | 46.87 |
| GSMUA_Achr9P07210_001 | Banana | nucleus | 40.8 | 46.56 |
| HORVU1Hr1G007300.2 | Barley | cytosol, mitochondrion, peroxisome | 30.46 | 46.49 |
| HORVU3Hr1G094600.2 | Barley | plastid | 55.17 | 46.49 |
| TraesCS2D01G281100.1 | Wheat | nucleus | 55.75 | 46.19 |
| Os11t0488900-00 | Rice | mitochondrion | 47.41 | 46.09 |
| GSMUA_Achr8P00700_001 | Banana | plastid | 57.76 | 46.0 |
| TraesCS2A01G282300.1 | Wheat | nucleus | 55.17 | 45.71 |
| HORVU4Hr1G080860.1 | Barley | mitochondrion | 26.15 | 44.83 |
| HORVU2Hr1G081910.1 | Barley | mitochondrion | 25.57 | 44.5 |
| Os02t0506400-00 | Rice | cytosol, mitochondrion, nucleus | 45.69 | 41.95 |
| Zm00001d016505_P001 | Maize | mitochondrion | 35.92 | 33.16 |
| KXG30224 | Sorghum | mitochondrion | 27.87 | 31.49 |
| Os05t0388151-00 | Rice | nucleus | 14.66 | 27.13 |
Protein Annotations
| Gene3D:1.25.40.10 | Gene3D:3.30.60.180 | MapMan:35.1 | EMBL:ACUP02010798 | InterPro:F-box-like_dom_sf | EnsemblPlantsGene:GLYMA_18G006600 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | UniProt:I1MYF3 | InterPro:IPR002893 | InterPro:IPR011990 |
| EnsemblPlants:KRG97416 | ProteinID:KRG97416 | ProteinID:KRG97416.1 | ProteinID:KRG97417.1 | PFAM:PF01753 | PFscan:PS50865 |
| PANTHER:PTHR12298 | PANTHER:PTHR12298:SF37 | SUPFAM:SSF144232 | SUPFAM:SSF81383 | SUPFAM:SSF81901 | InterPro:TPR-like_helical_dom_sf |
| UniParc:UPI000233EF6A | InterPro:Znf_MYND | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr18:+:487133..489681
Molecular Weight (calculated)
38092.4 Da
IEP (calculated)
8.280
GRAVY (calculated)
-0.285
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCRKRQKTS PDKTSDDFFD SLPDDLVLSI LCKLSSTATS PSDFISVLIT CKRLNSLGLH SLVLSKASHK TFSVKAKNWC DSLHRFLKHC ADAGNIEACY
101: TLGMIRFYCL QNRGSGASLM AKAAMNSHAP ALYSLAVIQF NGSGGTKNDK DLRAGVALCA RAAFLGHIDA LRELGHCLQD GYGVKLNVTE GRRFLVQANA
201: RELAAVLSAG NTKRPWLTWS HHPVTHPRLR SGCPLMSDYG CNVPAPDAHP ASQFMSEWFD IRGGFPGPDM RLCSHSGCGR PETRRHEFRR CSVCGLVNYC
301: SRACQALDWK FRHKAECATV ERWLDDDGEG VAGENDGGGD DGVMMVNS
101: TLGMIRFYCL QNRGSGASLM AKAAMNSHAP ALYSLAVIQF NGSGGTKNDK DLRAGVALCA RAAFLGHIDA LRELGHCLQD GYGVKLNVTE GRRFLVQANA
201: RELAAVLSAG NTKRPWLTWS HHPVTHPRLR SGCPLMSDYG CNVPAPDAHP ASQFMSEWFD IRGGFPGPDM RLCSHSGCGR PETRRHEFRR CSVCGLVNYC
301: SRACQALDWK FRHKAECATV ERWLDDDGEG VAGENDGGGD DGVMMVNS
001: MLPSRKTKRV FSCDFTPGRK RRRCVVVPSS VSPVPENTTG ADLLDSIPDD LVISILCKLG STSRCPADFI NVLLTCKRLK GLAMNPIVLS RLSPKAIAVK
101: AHNWSEYSHR FLKRCVDAGS LEACYTLGMI RFYCLQNRGN GASLMAKAAI SSHAPALYSL AVIQFNGSGG SKNDKDLRAG VALCARAAFL GHVDALRELG
201: HCLQDGYGVP QNVSEGRRFL VQANARELAA VLSSGIQARS TWLSLSQPPP PVVPNHGQQT CPLLSDFGCN VPAPETHPAN RFLADWFAVR GGDCPGDGLR
301: LCSHAGCGRP ETRKHEFRRC SVCGVVNYCS RACQALDWKL RHKMDCAPVQ RWLEEGDGGE GNVQIDGNGN GDNVLLPMS
101: AHNWSEYSHR FLKRCVDAGS LEACYTLGMI RFYCLQNRGN GASLMAKAAI SSHAPALYSL AVIQFNGSGG SKNDKDLRAG VALCARAAFL GHVDALRELG
201: HCLQDGYGVP QNVSEGRRFL VQANARELAA VLSSGIQARS TWLSLSQPPP PVVPNHGQQT CPLLSDFGCN VPAPETHPAN RFLADWFAVR GGDCPGDGLR
301: LCSHAGCGRP ETRKHEFRRC SVCGVVNYCS RACQALDWKL RHKMDCAPVQ RWLEEGDGGE GNVQIDGNGN GDNVLLPMS
Arabidopsis Description
F-box protein At1g67340 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYF9]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.