Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d042328_P001 | Maize | nucleus | 88.83 | 89.74 |
| Zm00001d012016_P001 | Maize | nucleus | 79.19 | 81.68 |
| Os01t0921800-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 76.65 | 77.84 |
| TraesCS3B01G467900.1 | Wheat | nucleus | 73.6 | 75.72 |
| TraesCS3D01G425300.1 | Wheat | nucleus | 72.59 | 74.48 |
| TraesCS3A01G429900.1 | Wheat | nucleus | 72.33 | 74.41 |
| TraesCS3B01G468000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 69.29 | 72.8 |
| HORVU3Hr1G094600.2 | Barley | plastid | 73.35 | 69.98 |
| CDX91552 | Canola | cytosol, nucleus, plastid | 40.36 | 56.79 |
| KRG97416 | Soybean | nucleus | 50.0 | 56.61 |
| KRH31482 | Soybean | mitochondrion | 51.02 | 55.52 |
| CDY16365 | Canola | cytosol, nucleus, plastid | 43.4 | 55.52 |
| PGSC0003DMT400074839 | Potato | nucleus | 52.54 | 55.2 |
| Solyc05g015420.2.1 | Tomato | mitochondrion | 53.55 | 54.66 |
| VIT_01s0010g03630.t01 | Wine grape | nucleus | 53.05 | 54.29 |
| CDY07427 | Canola | mitochondrion | 50.25 | 53.95 |
| CDY12640 | Canola | nucleus, plastid | 47.21 | 53.91 |
| CDY01803 | Canola | mitochondrion, plastid | 50.76 | 53.48 |
| EES09728 | Sorghum | cytosol, nucleus, plastid | 45.43 | 53.43 |
| CDY28891 | Canola | mitochondrion, plastid | 50.0 | 53.39 |
| Bra022516.1-P | Field mustard | cytosol | 44.92 | 53.31 |
| OQU81347 | Sorghum | mitochondrion, nucleus | 55.58 | 53.28 |
| CDY70354 | Canola | cytosol | 50.25 | 53.23 |
| CDY51342 | Canola | nucleus | 46.45 | 53.2 |
| Bra004092.1-P | Field mustard | mitochondrion | 49.49 | 53.13 |
| Bra004220.1-P | Field mustard | nucleus | 50.0 | 52.96 |
| AT1G67340.1 | Thale cress | mitochondrion, plastid | 50.51 | 52.51 |
| GSMUA_Achr5P25110_001 | Banana | nucleus | 48.73 | 51.89 |
| Bra034004.1-P | Field mustard | nucleus, plastid | 49.49 | 51.72 |
| AT5G50450.1 | Thale cress | cytosol, nucleus, plastid | 43.65 | 51.19 |
| KRH42672 | Soybean | mitochondrion | 50.25 | 50.64 |
| KRH54183 | Soybean | cytosol, nucleus, plastid | 44.67 | 50.57 |
| KRH58771 | Soybean | mitochondrion | 50.51 | 50.51 |
| KRH63766 | Soybean | cytosol, nucleus, plastid | 43.91 | 50.29 |
| GSMUA_Achr11P... | Banana | nucleus | 44.92 | 49.86 |
| GSMUA_Achr8P00700_001 | Banana | plastid | 48.22 | 43.48 |
| KXG30224 | Sorghum | mitochondrion | 23.86 | 30.52 |
Protein Annotations
| Gene3D:1.25.40.10 | Gene3D:3.30.60.180 | MapMan:35.1 | UniProt:A0A1B6Q7W3 | InterPro:F-box-like_dom_sf | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR002893 | InterPro:IPR011990 | EnsemblPlants:KXG34006 | ProteinID:KXG34006 |
| ProteinID:KXG34006.1 | PFAM:PF01753 | PFscan:PS50865 | PANTHER:PTHR12298 | PANTHER:PTHR12298:SF29 | EnsemblPlantsGene:SORBI_3003G406000 |
| SUPFAM:SSF144232 | SUPFAM:SSF81383 | SUPFAM:SSF81901 | InterPro:TPR-like_helical_dom_sf | UniParc:UPI00081ACF43 | InterPro:Znf_MYND |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:71314163..71316652
Molecular Weight (calculated)
40866.7 Da
IEP (calculated)
9.074
GRAVY (calculated)
-0.084
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MRTRSGSRYS NGGEVVALVG QKRKRSALAV AGECACGGRR KRLAGGPDYL DALPDDLVLS ILTKLAASSS APSDLLSVHL TCKRLNELGG HDMVFAKASP
101: ASLAVKAAAW SEPAQRFLKR CADAGNLEAC YILGMIRFYC QGSRSGGAAL LARAAVGGHA AALYSLAVIQ FNGSGGAKSD RDLRAGAALC ARAAALGHVD
201: ALRELGHCLQ DGYGVRRDPA EGRRLLVAAN ARELTLALSA ATASRHAVTA LPFAAAAAAA AAAGGVGGGG CPLLSDFGWS LPEAEPHAAN QFMVDWWASR
301: CAAQAGGKKP DGDSSGVDGS DGAELRLCSH VRCGRRETRR HEFRRCSVCG AANYCSRACQ ALDWKRAHKA QCVAMDRWLL AGVGGGGEVP QPQQ
101: ASLAVKAAAW SEPAQRFLKR CADAGNLEAC YILGMIRFYC QGSRSGGAAL LARAAVGGHA AALYSLAVIQ FNGSGGAKSD RDLRAGAALC ARAAALGHVD
201: ALRELGHCLQ DGYGVRRDPA EGRRLLVAAN ARELTLALSA ATASRHAVTA LPFAAAAAAA AAAGGVGGGG CPLLSDFGWS LPEAEPHAAN QFMVDWWASR
301: CAAQAGGKKP DGDSSGVDGS DGAELRLCSH VRCGRRETRR HEFRRCSVCG AANYCSRACQ ALDWKRAHKA QCVAMDRWLL AGVGGGGEVP QPQQ
001: MLPSRKTKRV FSCDFTPGRK RRRCVVVPSS VSPVPENTTG ADLLDSIPDD LVISILCKLG STSRCPADFI NVLLTCKRLK GLAMNPIVLS RLSPKAIAVK
101: AHNWSEYSHR FLKRCVDAGS LEACYTLGMI RFYCLQNRGN GASLMAKAAI SSHAPALYSL AVIQFNGSGG SKNDKDLRAG VALCARAAFL GHVDALRELG
201: HCLQDGYGVP QNVSEGRRFL VQANARELAA VLSSGIQARS TWLSLSQPPP PVVPNHGQQT CPLLSDFGCN VPAPETHPAN RFLADWFAVR GGDCPGDGLR
301: LCSHAGCGRP ETRKHEFRRC SVCGVVNYCS RACQALDWKL RHKMDCAPVQ RWLEEGDGGE GNVQIDGNGN GDNVLLPMS
101: AHNWSEYSHR FLKRCVDAGS LEACYTLGMI RFYCLQNRGN GASLMAKAAI SSHAPALYSL AVIQFNGSGG SKNDKDLRAG VALCARAAFL GHVDALRELG
201: HCLQDGYGVP QNVSEGRRFL VQANARELAA VLSSGIQARS TWLSLSQPPP PVVPNHGQQT CPLLSDFGCN VPAPETHPAN RFLADWFAVR GGDCPGDGLR
301: LCSHAGCGRP ETRKHEFRRC SVCGVVNYCS RACQALDWKL RHKMDCAPVQ RWLEEGDGGE GNVQIDGNGN GDNVLLPMS
Arabidopsis Description
F-box protein At1g67340 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYF9]
SUBAcon: [plastid,mitochondrion]
SUBAcon: [plastid,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.