Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- cytosol 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70354 | Canola | cytosol | 79.42 | 80.91 |
| CDY01803 | Canola | mitochondrion, plastid | 79.68 | 80.75 |
| Bra004220.1-P | Field mustard | nucleus | 79.16 | 80.65 |
| CDY28891 | Canola | mitochondrion, plastid | 75.2 | 77.24 |
| Bra004092.1-P | Field mustard | mitochondrion | 74.41 | 76.84 |
| CDY07427 | Canola | mitochondrion | 74.41 | 76.84 |
| CDY12640 | Canola | nucleus, plastid | 67.55 | 74.2 |
| Bra034004.1-P | Field mustard | nucleus, plastid | 72.03 | 72.41 |
| CDY51342 | Canola | nucleus | 65.7 | 72.38 |
| PGSC0003DMT400074839 | Potato | nucleus | 63.32 | 64.0 |
| VIT_01s0010g03630.t01 | Wine grape | nucleus | 64.12 | 63.12 |
| GSMUA_Achr8P17530_001 | Banana | mitochondrion | 58.58 | 62.18 |
| Solyc05g015420.2.1 | Tomato | mitochondrion | 63.32 | 62.18 |
| GSMUA_Achr9P29380_001 | Banana | mitochondrion | 52.51 | 60.3 |
| GSMUA_Achr9P01480_001 | Banana | nucleus | 54.09 | 59.25 |
| GSMUA_Achr6P06430_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 54.35 | 58.52 |
| AT5G50450.1 | Thale cress | cytosol, nucleus, plastid | 51.19 | 57.74 |
| GSMUA_Achr5P25110_001 | Banana | nucleus | 55.41 | 56.76 |
| GSMUA_Achr11P... | Banana | nucleus | 50.4 | 53.8 |
| TraesCS3B01G467900.1 | Wheat | nucleus | 52.77 | 52.22 |
| Zm00001d025218_P001 | Maize | nucleus | 51.19 | 52.01 |
| Zm00001d012016_P001 | Maize | nucleus | 52.24 | 51.83 |
| HORVU2Hr1G069440.2 | Barley | nucleus | 51.98 | 51.44 |
| TraesCS3A01G429900.1 | Wheat | nucleus | 51.72 | 51.17 |
| Os01t0921800-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 52.24 | 51.03 |
| Os04t0385600-01 | Rice | nucleus | 53.03 | 50.89 |
| Zm00001d003993_P001 | Maize | mitochondrion, nucleus | 53.3 | 50.88 |
| Zm00001d042328_P001 | Maize | nucleus | 52.24 | 50.77 |
| TraesCS2B01G299700.1 | Wheat | nucleus | 51.45 | 50.65 |
| TraesCS3D01G425300.1 | Wheat | nucleus | 51.19 | 50.52 |
| KXG34006 | Sorghum | nucleus | 52.51 | 50.51 |
| TraesCS3B01G468000.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 48.81 | 49.33 |
| OQU81347 | Sorghum | mitochondrion, nucleus | 53.3 | 49.15 |
| Zm00001d049186_P001 | Maize | mitochondrion | 41.95 | 48.48 |
| EES09728 | Sorghum | cytosol, nucleus, plastid | 41.95 | 47.46 |
| HORVU3Hr1G094600.2 | Barley | plastid | 51.45 | 47.22 |
| Os11t0488900-00 | Rice | mitochondrion | 44.59 | 47.21 |
| TraesCS2D01G281100.1 | Wheat | nucleus | 51.98 | 46.9 |
| TraesCS2A01G282300.1 | Wheat | nucleus | 51.72 | 46.67 |
| GSMUA_Achr9P07210_001 | Banana | nucleus | 36.68 | 45.57 |
| GSMUA_Achr8P00700_001 | Banana | plastid | 52.24 | 45.31 |
| HORVU1Hr1G007300.2 | Barley | cytosol, mitochondrion, peroxisome | 27.18 | 45.18 |
| HORVU4Hr1G080860.1 | Barley | mitochondrion | 23.75 | 44.34 |
| Os02t0506400-00 | Rice | cytosol, mitochondrion, nucleus | 44.33 | 44.33 |
| HORVU2Hr1G081910.1 | Barley | mitochondrion | 22.96 | 43.5 |
| Zm00001d016505_P001 | Maize | mitochondrion | 34.3 | 34.48 |
| Os05t0388151-00 | Rice | nucleus | 15.3 | 30.85 |
| KXG30224 | Sorghum | mitochondrion | 24.54 | 30.19 |
Protein Annotations
| Gene3D:1.25.40.10 | Gene3D:3.30.60.180 | MapMan:35.1 | EntrezGene:843055 | ProteinID:AAG00241.1 | ProteinID:AEE34633.1 |
| ArrayExpress:AT1G67340 | EnsemblPlantsGene:AT1G67340 | RefSeq:AT1G67340 | TAIR:AT1G67340 | RefSeq:AT1G67340-TAIR-G | EnsemblPlants:AT1G67340.1 |
| TAIR:AT1G67340.1 | EMBL:AY057623 | EMBL:AY093102 | EMBL:BT000146 | InterPro:F-box-like_dom_sf | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 |
| InterPro:IPR002893 | InterPro:IPR011990 | RefSeq:NP_564894.1 | PFAM:PF01753 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50865 |
| PANTHER:PTHR12298 | PANTHER:PTHR12298:SF37 | UniProt:Q9FYF9 | SUPFAM:SSF144232 | SUPFAM:SSF81383 | SUPFAM:SSF81901 |
| InterPro:TPR-like_helical_dom_sf | UniParc:UPI00000AC2FD | InterPro:Znf_MYND | SEG:seg | : | : |
Description
F-box protein At1g67340 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYF9]
Coordinates
chr1:+:25230239..25231943
Molecular Weight (calculated)
41014.4 Da
IEP (calculated)
8.691
GRAVY (calculated)
-0.169
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPSRKTKRV FSCDFTPGRK RRRCVVVPSS VSPVPENTTG ADLLDSIPDD LVISILCKLG STSRCPADFI NVLLTCKRLK GLAMNPIVLS RLSPKAIAVK
101: AHNWSEYSHR FLKRCVDAGS LEACYTLGMI RFYCLQNRGN GASLMAKAAI SSHAPALYSL AVIQFNGSGG SKNDKDLRAG VALCARAAFL GHVDALRELG
201: HCLQDGYGVP QNVSEGRRFL VQANARELAA VLSSGIQARS TWLSLSQPPP PVVPNHGQQT CPLLSDFGCN VPAPETHPAN RFLADWFAVR GGDCPGDGLR
301: LCSHAGCGRP ETRKHEFRRC SVCGVVNYCS RACQALDWKL RHKMDCAPVQ RWLEEGDGGE GNVQIDGNGN GDNVLLPMS
101: AHNWSEYSHR FLKRCVDAGS LEACYTLGMI RFYCLQNRGN GASLMAKAAI SSHAPALYSL AVIQFNGSGG SKNDKDLRAG VALCARAAFL GHVDALRELG
201: HCLQDGYGVP QNVSEGRRFL VQANARELAA VLSSGIQARS TWLSLSQPPP PVVPNHGQQT CPLLSDFGCN VPAPETHPAN RFLADWFAVR GGDCPGDGLR
301: LCSHAGCGRP ETRKHEFRRC SVCGVVNYCS RACQALDWKL RHKMDCAPVQ RWLEEGDGGE GNVQIDGNGN GDNVLLPMS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.