Factsheet for GSMUA_Achr9P07210_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P29380_001	Banana	mitochondrion	50.82	46.97
GSMUA_Achr6P06430_001	Banana	cytosol, mitochondrion, nucleus, plastid	53.77	46.59
CDY16365	Canola	cytosol, nucleus, plastid	45.25	44.81
GSMUA_Achr9P01480_001	Banana	nucleus	50.49	44.51
GSMUA_Achr8P17530_001	Banana	mitochondrion	51.48	43.98
CDX91552	Canola	cytosol, nucleus, plastid	39.67	43.21
Bra022516.1-P	Field mustard	cytosol	45.9	42.17
KRG97416	Soybean	nucleus	46.56	40.8
VIT_01s0010g03630.t01	Wine grape	nucleus	51.15	40.52
AT5G50450.1	Thale cress	cytosol, nucleus, plastid	44.26	40.18
GSMUA_Achr5P25110_001	Banana	nucleus	48.2	39.73
KRH31482	Soybean	mitochondrion	46.89	39.5
PGSC0003DMT400074839	Potato	nucleus	48.2	39.2
CDY12640	Canola	nucleus, plastid	44.26	39.13
Bra004092.1-P	Field mustard	mitochondrion	46.56	38.69
KRH63766	Soybean	cytosol, nucleus, plastid	43.61	38.66
CDY07427	Canola	mitochondrion	46.23	38.42
Solyc05g015420.2.1	Tomato	mitochondrion	48.52	38.34
GSMUA_Achr11P...	Banana	nucleus	44.59	38.31
KRH58771	Soybean	mitochondrion	49.18	38.07
CDY28891	Canola	mitochondrion, plastid	45.9	37.94
KRH54183	Soybean	cytosol, nucleus, plastid	43.28	37.93
CDY51342	Canola	nucleus	42.62	37.79
KRH42672	Soybean	mitochondrion	48.2	37.6
CDY01803	Canola	mitochondrion, plastid	45.9	37.43
Bra034004.1-P	Field mustard	nucleus, plastid	46.23	37.4
Bra004220.1-P	Field mustard	nucleus	45.57	37.37
CDY70354	Canola	cytosol	45.57	37.37
AT1G67340.1	Thale cress	mitochondrion, plastid	45.57	36.68
GSMUA_Achr8P00700_001	Banana	plastid	45.57	31.81

Protein Annotations

EnsemblPlants:GSMUA_Achr9P07210_001	EnsemblPlants:GSMUA_Achr9T07210_001	EnsemblPlantsGene:GSMUA_Achr9G07210_001	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:IPR011990	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR12298	PANTHER:PTHR12298:SF37
SEG:seg	SUPFAM:SSF81383	SUPFAM:SSF81901	UniParc:UPI000294C867	UniProt:M0TY80	MapMan:35.1

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G07210_001]

Coordinates

chr9:-:4560393..4561529

Molecular Weight (calculated)

32945.7 Da

IEP (calculated)

11.546

GRAVY (calculated)

-0.122

Length

305 amino acids

Sequence
(BLAST)

001: MKRRRLAREE GDLGRKRPQV GAAEEGSGFF SCLPDDLVVA ILCRLSASTA RPSDLLGVLI ACKRLNRLGL DPLVLSNASV ESLAIRAMNW SASAHRFLKR
101: CADAGNLEAC YILGMIRFYC LGNRRSGLSL MARAAICNHM EALYSLAVIH FNGSGRSNSD KDLSAGVAFC ARAASLGHED AIRVLGHCLQ DGYGVRRNAA
201: KGRRFLLLAN ARELATSGAA RRPARGTLRT SSWWSGSRRG AALWWRARGS ACVPTAAAVG QRRGATSSDG ALLAVWPATA RGRARRCTGS WRTRPSVYQW
301: SDGLI

Best Arabidopsis Sequence Match ( AT1G74875.1 )
(BLAST)

001: MVNLGALNDE DKRKCANMFQ IHLVINVLSS SLSEFRNLQL VSKSFKRISN DRYILQRLSL NKIPLLPWRN RKKFHNFFKR CRKSGNLEAI YRKGLVDYFH
101: RDSHERQRDR GLKHIAKTAN NGNQEAQYVY GLILICLGGK TKQNGFKILS SLRKPLMLSN TIKEMEKHRT HIRNMWWWGE PMMRHLQKSY VRENCNCDGR
201: TEIFPNYCFR HRFGEDDDML TSSACEICLC HHEVKLFFAN IKE

Arabidopsis Description

FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G67623.1); Has 36 Blast hits to 36 proteins in 8 spe /.../Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). [Source:TAIR;Acc:AT1G74875]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.