Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX91552 | Canola | cytosol, nucleus, plastid | 27.66 | 18.57 |
| CDY16365 | Canola | cytosol, nucleus, plastid | 29.26 | 17.86 |
| HORVU2Hr1G069440.2 | Barley | nucleus | 35.64 | 17.49 |
| Os04t0385600-01 | Rice | nucleus | 36.7 | 17.47 |
| Zm00001d025218_P001 | Maize | nucleus | 34.57 | 17.43 |
| TraesCS2B01G299700.1 | Wheat | nucleus | 35.11 | 17.14 |
| Zm00001d003993_P001 | Maize | mitochondrion, nucleus | 36.17 | 17.13 |
| OQU81347 | Sorghum | mitochondrion, nucleus | 36.7 | 16.79 |
| Os11t0488900-00 | Rice | mitochondrion | 31.91 | 16.76 |
| GSMUA_Achr5P25110_001 | Banana | nucleus | 32.98 | 16.76 |
| Bra022516.1-P | Field mustard | cytosol | 29.26 | 16.57 |
| AT5G50450.1 | Thale cress | cytosol, nucleus, plastid | 29.26 | 16.37 |
| CDY28891 | Canola | mitochondrion, plastid | 31.91 | 16.26 |
| TraesCS2D01G281100.1 | Wheat | nucleus | 35.64 | 15.95 |
| TraesCS2A01G282300.1 | Wheat | nucleus | 35.64 | 15.95 |
| Bra004092.1-P | Field mustard | mitochondrion | 30.85 | 15.8 |
| CDY07427 | Canola | mitochondrion | 30.85 | 15.8 |
| CDY70354 | Canola | cytosol | 30.85 | 15.59 |
| Bra004220.1-P | Field mustard | nucleus | 30.85 | 15.59 |
| CDY01803 | Canola | mitochondrion, plastid | 30.85 | 15.51 |
| GSMUA_Achr11P... | Banana | nucleus | 29.26 | 15.49 |
| VIT_01s0010g03630.t01 | Wine grape | nucleus | 31.38 | 15.32 |
| AT1G67340.1 | Thale cress | mitochondrion, plastid | 30.85 | 15.3 |
| Bra034004.1-P | Field mustard | nucleus, plastid | 30.32 | 15.12 |
| CDY12640 | Canola | nucleus, plastid | 27.13 | 14.78 |
| Solyc05g015420.2.1 | Tomato | mitochondrion | 30.32 | 14.77 |
| PGSC0003DMT400074839 | Potato | nucleus | 29.26 | 14.67 |
| KRG97416 | Soybean | nucleus | 27.13 | 14.66 |
| KRH31482 | Soybean | mitochondrion | 28.19 | 14.64 |
| KRH63766 | Soybean | cytosol, nucleus, plastid | 26.6 | 14.53 |
| CDY51342 | Canola | nucleus | 26.6 | 14.53 |
| Os02t0506400-00 | Rice | cytosol, mitochondrion, nucleus | 29.26 | 14.51 |
| Os01t0921800-00 | Rice | cytosol, mitochondrion, nucleus, plastid | 29.79 | 14.43 |
| KRH54183 | Soybean | cytosol, nucleus, plastid | 26.6 | 14.37 |
| KRH58771 | Soybean | mitochondrion | 29.26 | 13.96 |
| KRH42672 | Soybean | mitochondrion | 28.72 | 13.81 |
| GSMUA_Achr8P00700_001 | Banana | plastid | 31.91 | 13.73 |
Protein Annotations
| EnsemblPlants:Os05t0388151-00 | EnsemblPlantsGene:Os05g0388151 | PANTHER:PTHR12298 | PANTHER:PTHR12298:SF37 | ProteinID:BAS93823.1 | SEG:seg |
| UniParc:UPI000393A305 | UniProt:A0A0P0WM36 | MapMan:35.2 | : | : | : |
Description
Hypothetical protein. (Os05t0388151-00)
Coordinates
chr5:-:18774154..18779300
Molecular Weight (calculated)
20385.4 Da
IEP (calculated)
12.344
GRAVY (calculated)
-0.754
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: GREGRTLDAA TRGPRCRGWS SEAPYVQRRD HRHRRRDRRR LRAAARGGQC VRGHCGGAGR GGRRFAGGEE RGSATGSIGG AVRVRLRERR GGRTTTSARG
101: QRCARAASLG HVDALRELGH CPQEGYGMRC FVLDGHRLLI QGNTRELAAT VTASASLLRA TDKLAASRAA LVPPLRLRLP HRGQGTQL
101: QRCARAASLG HVDALRELGH CPQEGYGMRC FVLDGHRLLI QGNTRELAAT VTASASLLRA TDKLAASRAA LVPPLRLRLP HRGQGTQL
001: MTHLNKKQRL ENNHNNTVNN HFEDLHDDLI ISILRKLATS ASSPSDFLTV LSTCKRLNRL GLHPLVLSKA GTQTLAVTAE KWSDSSHKFL KLCVNAGNID
101: ASYSLGMIRF YCLQNPVSGA SLMAKAAIKS HAPALYSLSV IQFNGSGGSK TDKNLRAGVA LCARSAYLGH VDALRELGHC LQDGYGVPRD VSEGRRLLIQ
201: ANARELACSL RSYLSLKSGD ENETLTDLSV VPVQEIHPVN RFLKEWFSSG RVDLAEGLRM CSHGGCGRPE TRAHEFRRCS VCGKVNYCSR GCQALDWRAK
301: HKVECTPLDL WVAAAAEIGD DGEAVAVEID DNHGER
101: ASYSLGMIRF YCLQNPVSGA SLMAKAAIKS HAPALYSLSV IQFNGSGGSK TDKNLRAGVA LCARSAYLGH VDALRELGHC LQDGYGVPRD VSEGRRLLIQ
201: ANARELACSL RSYLSLKSGD ENETLTDLSV VPVQEIHPVN RFLKEWFSSG RVDLAEGLRM CSHGGCGRPE TRAHEFRRCS VCGKVNYCSR GCQALDWRAK
301: HKVECTPLDL WVAAAAEIGD DGEAVAVEID DNHGER
Arabidopsis Description
F-box protein At5g50450 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK27]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.