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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • mitochondrion 2
  • nucleus 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G429900.1 Wheat nucleus 95.57 95.82
TraesCS3B01G467900.1 Wheat nucleus 88.8 89.03
TraesCS3B01G468000.1 Wheat cytosol, mitochondrion, nucleus, plastid 86.46 88.53
HORVU3Hr1G094600.2 Barley plastid 89.84 83.54
Os01t0921800-00 Rice cytosol, mitochondrion, nucleus, plastid 78.91 78.09
Zm00001d042328_P001 Maize nucleus 75.0 73.85
Zm00001d012016_P001 Maize nucleus 72.66 73.04
KXG34006 Sorghum nucleus 74.48 72.59
CDX91552 Canola cytosol, nucleus, plastid 41.15 56.43
KRG97416 Soybean nucleus 49.48 54.6
CDY16365 Canola cytosol, nucleus, plastid 43.75 54.55
GSMUA_Achr5P25110_001 Banana nucleus 52.34 54.32
Solyc05g015420.2.1 Tomato mitochondrion 54.17 53.89
KRH31482 Soybean mitochondrion 50.78 53.87
PGSC0003DMT400074839 Potato nucleus 52.6 53.87
VIT_01s0010g03630.t01 Wine grape nucleus 53.39 53.25
CDY12640 Canola nucleus, plastid 47.4 52.75
CDY28891 Canola mitochondrion, plastid 50.26 52.3
Bra022516.1-P Field mustard cytosol 45.05 52.11
Bra004092.1-P Field mustard mitochondrion 49.48 51.77
CDY07427 Canola mitochondrion 49.48 51.77
TraesCS2D01G281100.1 Wheat nucleus 56.51 51.67
CDY51342 Canola nucleus 46.09 51.45
CDY01803 Canola mitochondrion, plastid 50.0 51.34
GSMUA_Achr11P... Banana nucleus 47.4 51.27
AT1G67340.1 Thale cress mitochondrion, plastid 50.52 51.19
Bra004220.1-P Field mustard nucleus 49.48 51.08
CDY70354 Canola cytosol 49.48 51.08
Bra034004.1-P Field mustard nucleus, plastid 50.0 50.93
AT5G50450.1 Thale cress cytosol, nucleus, plastid 44.53 50.89
KRH42672 Soybean mitochondrion 49.74 48.85
KRH58771 Soybean mitochondrion 50.0 48.73
KRH63766 Soybean cytosol, nucleus, plastid 43.49 48.55
KRH54183 Soybean cytosol, nucleus, plastid 43.75 48.28
GSMUA_Achr8P00700_001 Banana plastid 48.96 43.02
Protein Annotations
EnsemblPlants:TraesCS3D01G425300.1EnsemblPlantsGene:TraesCS3D01G425300Gene3D:1.25.40.10Gene3D:3.30.60.180GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:F-box-like_dom_sfInterPro:IPR002893InterPro:IPR011990InterPro:TPR-like_helical_dom_sfInterPro:Znf_MYND
PANTHER:PTHR12298PANTHER:PTHR12298:SF29PFAM:PF01753PFscan:PS50865SEG:segSUPFAM:SSF144232
SUPFAM:SSF81383SUPFAM:SSF81901MapMan:35.1:::
Description
No Description!
Coordinates
chr3D:-:537556891..537558275
Molecular Weight (calculated)
40089.8 Da
IEP (calculated)
9.274
GRAVY (calculated)
-0.118
Length
384 amino acids
Sequence
(BLAST)
001: MRTRSGSLYT CGGVEPAAPV AGQKRKRTPA AAGEVCGGRR KRQASGPDYL DGIPDDLVLS IFSKLAASAN SPSDLLSVHL TCKRLNGLGQ QDMVFAKASP
101: ASLAVKAAAW SEPVQRFLKR CADAGNLEAC YILGMIRFYC LGSRSGGAAL LAKAAVGGHP AALYSLAVIQ FNGSGGAKSD RDLRAGAALC ARSAALGHVD
201: ALRELGHCLQ DGYGVRRDPA EGRRLLVAAN ARELSLALAA AAASATYPFA SLPISAVAGG AGGVSSSPLL SDFGWSLPEA EPHTANQFMS DWWASRGVQA
301: CAKKTDAAAT GGDGEGELRL CSHMRCGRKE TRRHEFRRCS VCGAANYCSR ACQALDWKRA HKAQCVPMDR WLVGAAANAA APQQ
Best Arabidopsis Sequence Match ( AT1G67340.1 )
(BLAST)
001: MLPSRKTKRV FSCDFTPGRK RRRCVVVPSS VSPVPENTTG ADLLDSIPDD LVISILCKLG STSRCPADFI NVLLTCKRLK GLAMNPIVLS RLSPKAIAVK
101: AHNWSEYSHR FLKRCVDAGS LEACYTLGMI RFYCLQNRGN GASLMAKAAI SSHAPALYSL AVIQFNGSGG SKNDKDLRAG VALCARAAFL GHVDALRELG
201: HCLQDGYGVP QNVSEGRRFL VQANARELAA VLSSGIQARS TWLSLSQPPP PVVPNHGQQT CPLLSDFGCN VPAPETHPAN RFLADWFAVR GGDCPGDGLR
301: LCSHAGCGRP ETRKHEFRRC SVCGVVNYCS RACQALDWKL RHKMDCAPVQ RWLEEGDGGE GNVQIDGNGN GDNVLLPMS
Arabidopsis Description
F-box protein At1g67340 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYF9]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.