Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G088880.1 | Barley | plastid | 92.04 | 100.0 |
| TraesCS1A01G403300.1 | Wheat | plastid | 91.35 | 99.25 |
| TraesCS1B01G432700.1 | Wheat | plastid | 91.35 | 99.25 |
| TraesCS1D01G411300.1 | Wheat | plastid | 91.0 | 98.87 |
| HORVU6Hr1G091660.1 | Barley | plastid | 87.89 | 95.49 |
| HORVU5Hr1G109250.1 | Barley | plastid | 87.54 | 95.11 |
| HORVU1Hr1G078380.1 | Barley | plastid | 86.85 | 94.72 |
| HORVU7Hr1G040370.1 | Barley | plastid | 86.85 | 94.36 |
| HORVU1Hr1G088900.1 | Barley | plastid | 86.51 | 93.98 |
| HORVU6Hr1G016880.1 | Barley | plastid | 86.51 | 93.98 |
| HORVU6Hr1G016850.1 | Barley | plastid | 86.16 | 93.61 |
| HORVU5Hr1G124160.1 | Barley | plastid | 83.74 | 90.98 |
| HORVU5Hr1G087250.1 | Barley | plastid | 83.74 | 90.98 |
| Os01t0720500-01 | Rice | plastid | 83.05 | 90.57 |
| HORVU6Hr1G091650.1 | Barley | plastid | 87.89 | 89.44 |
| EES01022 | Sorghum | plastid | 82.01 | 89.43 |
| Zm00001d044399_P001 | Maize | plastid | 81.66 | 89.39 |
| Zm00001d044401_P001 | Maize | plastid | 81.66 | 89.39 |
| Zm00001d044402_P001 | Maize | plastid | 81.66 | 89.39 |
| Zm00001d044396_P001 | Maize | plastid | 81.31 | 89.02 |
| Zm00001d011285_P001 | Maize | plastid | 81.31 | 89.02 |
| OQU87124 | Sorghum | plastid | 80.97 | 88.64 |
| HORVU6Hr1G016890.6 | Barley | plastid | 87.2 | 86.9 |
| HORVU1Hr1G088920.3 | Barley | plastid | 87.89 | 85.81 |
| PGSC0003DMT400034902 | Potato | plastid | 38.41 | 84.73 |
| HORVU1Hr1G089180.1 | Barley | plastid | 90.31 | 82.33 |
| HORVU7Hr1G040380.1 | Barley | plastid | 85.81 | 79.49 |
| HORVU5Hr1G109260.4 | Barley | plastid | 88.93 | 79.32 |
| HORVU5Hr1G109360.1 | Barley | plastid | 88.93 | 79.32 |
| HORVU7Hr1G058120.1 | Barley | plastid | 84.08 | 73.19 |
| HORVU2Hr1G040780.7 | Barley | plastid | 61.59 | 65.44 |
| HORVU1Hr1G088930.2 | Barley | endoplasmic reticulum | 25.61 | 62.71 |
| HORVU5Hr1G082420.1 | Barley | plastid | 70.24 | 59.18 |
| HORVU2Hr1G041270.2 | Barley | endoplasmic reticulum, plastid | 17.65 | 42.5 |
| HORVU5Hr1G054000.1 | Barley | mitochondrion, plastid | 40.83 | 38.06 |
| HORVU4Hr1G015260.2 | Barley | plastid | 35.99 | 36.11 |
| HORVU7Hr1G046320.2 | Barley | plastid | 32.87 | 33.33 |
| HORVU2Hr1G036960.4 | Barley | plastid | 32.18 | 32.98 |
| HORVU5Hr1G066280.1 | Barley | plastid | 26.64 | 31.43 |
| HORVU5Hr1G062240.1 | Barley | plastid | 30.45 | 30.88 |
| HORVU2Hr1G079920.1 | Barley | cytosol, mitochondrion, plastid | 24.57 | 24.23 |
| HORVU5Hr1G013200.1 | Barley | plastid | 23.18 | 23.67 |
| HORVU2Hr1G079910.1 | Barley | cytosol | 12.8 | 18.23 |
Protein Annotations
| MapMan:1.1.1.1.1 | Gene3D:1.10.3460.10 | UniProt:A0A287GMY4 | InterPro:Chloro_AB-bd_pln | InterPro:Chloroa_b-bind | InterPro:Chlorophyll_a/b-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006091 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009522 |
| GO:GO:0009523 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009765 | GO:GO:0009987 |
| GO:GO:0015979 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016168 | GO:GO:0018298 | GO:GO:0019538 |
| EnsemblPlantsGene:HORVU1Hr1G088870 | EnsemblPlants:HORVU1Hr1G088870.2 | InterPro:IPR023329 | PFAM:PF00504 | PANTHER:PTHR21649 | PANTHER:PTHR21649:SF56 |
| SUPFAM:SSF103511 | UniParc:UPI000B47E712 | SEG:seg | : | : | : |
Description
Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A287GMY4]
Coordinates
chrchr1H:-:542809072..542810110
Molecular Weight (calculated)
30789.7 Da
IEP (calculated)
6.088
GRAVY (calculated)
0.030
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: AIHHHSPTVS EHAHRTRTSL LEAMATTAMA LSSSSFAGKA VKDLPSSALF GEARVTMRKT AAKAKPVSSS SPWYGSDRVL YLGPLSGDPP SYLTGEFPGD
101: YGWDTAGLSA DPETFAKNRE LEVIHCRWAM LGALGCVFPE LLARNGVKFG EAVWFKAGSQ IFSEGGLDYL GNPSLVHAQS ILAIWACQVV LMGAVEGYRV
201: AGGPLGEIVD PLYPGGSFDP LGLADDPEAF AELKVKEIKN GRLAMFSMFG FFVQAIVTGK GPLENLADHL ADPVNNNAWA FATNFVPGK
101: YGWDTAGLSA DPETFAKNRE LEVIHCRWAM LGALGCVFPE LLARNGVKFG EAVWFKAGSQ IFSEGGLDYL GNPSLVHAQS ILAIWACQVV LMGAVEGYRV
201: AGGPLGEIVD PLYPGGSFDP LGLADDPEAF AELKVKEIKN GRLAMFSMFG FFVQAIVTGK GPLENLADHL ADPVNNNAWA FATNFVPGK
001: MAASTMALSS PAFAGKAVNL SPAASEVLGS GRVTMRKTVA KPKGPSGSPW YGSDRVKYLG PFSGESPSYL TGEFPGDYGW DTAGLSADPE TFARNRELEV
101: IHSRWAMLGA LGCVFPELLA RNGVKFGEAV WFKAGSQIFS DGGLDYLGNP SLVHAQSILA IWATQVILMG AVEGYRVAGN GPLGEAEDLL YPGGSFDPLG
201: LATDPEAFAE LKVKELKNGR LAMFSMFGFF VQAIVTGKGP IENLADHLAD PVNNNAWAFA TNFVPGK
101: IHSRWAMLGA LGCVFPELLA RNGVKFGEAV WFKAGSQIFS DGGLDYLGNP SLVHAQSILA IWATQVILMG AVEGYRVAGN GPLGEAEDLL YPGGSFDPLG
201: LATDPEAFAE LKVKELKNGR LAMFSMFGFF VQAIVTGKGP IENLADHLAD PVNNNAWAFA TNFVPGK
Arabidopsis Description
LHCB1.1Chlorophyll a-b binding protein 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ87]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.