Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G220100.1 | Wheat | golgi, plastid | 88.3 | 97.65 |
| TraesCS2D01G200700.1 | Wheat | plastid | 87.94 | 97.25 |
| TraesCS2A01G187200.1 | Wheat | plastid | 88.3 | 96.89 |
| PGSC0003DMT400037285 | Potato | extracellular, vacuole | 52.13 | 94.23 |
| Zm00001d006663_P001 | Maize | plastid | 79.08 | 85.77 |
| KXG36552 | Sorghum | plastid | 79.79 | 85.55 |
| Os07t0577600-01 | Rice | plastid | 79.79 | 85.55 |
| Zm00001d021906_P001 | Maize | plastid | 79.08 | 82.59 |
| CDY43936 | Canola | plastid | 72.34 | 79.69 |
| Bra014433.1-P | Field mustard | plastid | 71.63 | 78.91 |
| CDX89120 | Canola | plastid | 71.63 | 78.91 |
| AT3G61470.1 | Thale cress | plastid | 70.92 | 77.82 |
| VIT_01s0010g03620.t01 | Wine grape | plastid | 74.11 | 77.12 |
| Solyc10g006230.2.1 | Tomato | plastid | 73.76 | 77.04 |
| KRH06319 | Soybean | nucleus, plastid | 73.76 | 77.04 |
| Bra003451.1-P | Field mustard | plastid | 69.86 | 76.06 |
| CDY51572 | Canola | plastid | 69.15 | 75.29 |
| GSMUA_Achr6P20660_001 | Banana | mitochondrion | 54.26 | 74.63 |
| KRH47742 | Soybean | nucleus | 70.92 | 70.92 |
| GSMUA_Achr9P01470_001 | Banana | endoplasmic reticulum | 62.41 | 70.68 |
| KRH68993 | Soybean | plastid | 71.28 | 65.26 |
| AT5G28450.1 | Thale cress | plastid | 36.17 | 58.96 |
| HORVU5Hr1G062240.1 | Barley | plastid | 51.06 | 50.53 |
| HORVU5Hr1G066280.1 | Barley | plastid | 40.07 | 46.12 |
| HORVU2Hr1G041270.2 | Barley | endoplasmic reticulum, plastid | 17.38 | 40.83 |
| HORVU5Hr1G109250.1 | Barley | plastid | 32.62 | 34.59 |
| HORVU1Hr1G088880.1 | Barley | plastid | 31.91 | 33.83 |
| HORVU1Hr1G078380.1 | Barley | plastid | 31.56 | 33.58 |
| HORVU5Hr1G124160.1 | Barley | plastid | 31.56 | 33.46 |
| HORVU7Hr1G040370.1 | Barley | plastid | 31.56 | 33.46 |
| HORVU5Hr1G087250.1 | Barley | plastid | 31.56 | 33.46 |
| HORVU6Hr1G016880.1 | Barley | plastid | 31.21 | 33.08 |
| HORVU6Hr1G091660.1 | Barley | plastid | 31.21 | 33.08 |
| HORVU1Hr1G088900.1 | Barley | plastid | 31.21 | 33.08 |
| HORVU6Hr1G016850.1 | Barley | plastid | 30.85 | 32.71 |
| HORVU1Hr1G088870.2 | Barley | plastid | 32.98 | 32.18 |
| HORVU6Hr1G091650.1 | Barley | plastid | 31.21 | 30.99 |
| HORVU7Hr1G046320.2 | Barley | plastid | 31.21 | 30.88 |
| HORVU6Hr1G016890.6 | Barley | plastid | 31.56 | 30.69 |
| HORVU2Hr1G040780.7 | Barley | plastid | 29.08 | 30.15 |
| HORVU1Hr1G088920.3 | Barley | plastid | 30.85 | 29.39 |
| HORVU5Hr1G109360.1 | Barley | plastid | 33.33 | 29.01 |
| HORVU5Hr1G109260.4 | Barley | plastid | 33.33 | 29.01 |
| HORVU1Hr1G089180.1 | Barley | plastid | 31.91 | 28.39 |
| HORVU7Hr1G040380.1 | Barley | plastid | 30.85 | 27.88 |
| HORVU5Hr1G054000.1 | Barley | mitochondrion, plastid | 30.5 | 27.74 |
| HORVU2Hr1G079920.1 | Barley | cytosol, mitochondrion, plastid | 28.72 | 27.65 |
| HORVU7Hr1G058120.1 | Barley | plastid | 31.56 | 26.81 |
| HORVU1Hr1G088930.2 | Barley | endoplasmic reticulum | 10.64 | 25.42 |
| HORVU4Hr1G015260.2 | Barley | plastid | 25.53 | 25.0 |
| HORVU5Hr1G082420.1 | Barley | plastid | 29.43 | 24.2 |
| HORVU5Hr1G013200.1 | Barley | plastid | 23.05 | 22.97 |
| HORVU2Hr1G079910.1 | Barley | cytosol | 15.96 | 22.17 |
Protein Annotations
| MapMan:1.1.4.1.2 | Gene3D:1.10.3460.10 | UniProt:A0A287HQH2 | InterPro:Chloro_AB-bd_pln | InterPro:Chloroa_b-bind | InterPro:Chlorophyll_a/b-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006091 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009522 |
| GO:GO:0009523 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009765 | GO:GO:0009987 |
| GO:GO:0015979 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016168 | GO:GO:0018298 | GO:GO:0019538 |
| EnsemblPlantsGene:HORVU2Hr1G036960 | EnsemblPlants:HORVU2Hr1G036960.4 | InterPro:IPR023329 | PFAM:PF00504 | PANTHER:PTHR21649 | PANTHER:PTHR21649:SF57 |
| SUPFAM:SSF103511 | UniParc:UPI000B469AC3 | SEG:seg | : | : | : |
Description
Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A287HQH2]
Coordinates
chrchr2H:-:167627915..167629387
Molecular Weight (calculated)
30141.9 Da
IEP (calculated)
8.812
GRAVY (calculated)
-0.083
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: PTPRTHARAS PRYRHSRPAS ARTGAATMAL VSSSSATAVA ALPSNGLAGA RTSFLGAAGK AAASRTSFAV RAAAPERPIW FPGSTPPPLD ACSLPGDFGF
101: DPWGLGSDPE SLRWNVQAEL VHCRWAMLGA AGIFIPELLT KIGILNTPSW YTAGEQEYFT DTTTLFIVEL ILIGWAEGRR WADIIKPGCV NTDPIFPNNK
201: LTGTDVGYPG GLWFDPLGYG TGSPEKLKEL RTKEIKNGRL AMLAVMGAWF QAEYTGTGPI DNLFAHLADP GHATIFRAFA PK
101: DPWGLGSDPE SLRWNVQAEL VHCRWAMLGA AGIFIPELLT KIGILNTPSW YTAGEQEYFT DTTTLFIVEL ILIGWAEGRR WADIIKPGCV NTDPIFPNNK
201: LTGTDVGYPG GLWFDPLGYG TGSPEKLKEL RTKEIKNGRL AMLAVMGAWF QAEYTGTGPI DNLFAHLADP GHATIFRAFA PK
001: MASSLCASSA IAAISSPSFL GGKKLRLKKK LTVPAVSRPD ASVRAVAADP DRPIWFPGST PPEWLDGSLP GDFGFDPLGL SSDPDSLKWN VQAEIVHCRW
101: AMLGAAGIFI PEFLTKIGIL NTPSWYTAGE QEYFTDKTTL FVVELILIGW AEGRRWADII KPGSVNTDPV FPNNKLTGTD VGYPGGLWFD PLGWGSGSPA
201: KLKELRTKEI KNGRLAMLAV MGAWFQHIYT GTGPIDNLFA HLADPGHATI FAAFTPK
101: AMLGAAGIFI PEFLTKIGIL NTPSWYTAGE QEYFTDKTTL FVVELILIGW AEGRRWADII KPGSVNTDPV FPNNKLTGTD VGYPGGLWFD PLGWGSGSPA
201: KLKELRTKEI KNGRLAMLAV MGAWFQHIYT GTGPIDNLFA HLADPGHATI FAAFTPK
Arabidopsis Description
LHCA2Photosystem I chlorophyll a/b-binding protein 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SYW8]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.