Factsheet for AT3G61470.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014433.1-P	Field mustard	plastid	94.94	95.31
CDX89120	Canola	plastid	94.94	95.31
CDY43936	Canola	plastid	94.94	95.31
PGSC0003DMT400037285	Potato	extracellular, vacuole	57.59	94.87
Bra003451.1-P	Field mustard	plastid	93.0	92.28
CDY51572	Canola	plastid	92.22	91.51
Solyc10g006230.2.1	Tomato	plastid	85.6	81.48
VIT_01s0010g03620.t01	Wine grape	plastid	85.21	80.81
TraesCS2D01G200700.1	Wheat	plastid	79.38	80.0
TraesCS2B01G220100.1	Wheat	golgi, plastid	79.38	80.0
KRH06319	Soybean	nucleus, plastid	83.66	79.63
TraesCS2A01G187200.1	Wheat	plastid	79.38	79.38
Zm00001d006663_P001	Maize	plastid	80.16	79.23
KXG36552	Sorghum	plastid	80.93	79.09
Os07t0577600-01	Rice	plastid	79.77	77.95
GSMUA_Achr6P20660_001	Banana	mitochondrion	61.48	77.07
Zm00001d021906_P001	Maize	plastid	79.77	75.93
KRH47742	Soybean	nucleus	80.54	73.4
GSMUA_Achr9P01470_001	Banana	endoplasmic reticulum	70.82	73.09
HORVU2Hr1G036960.4	Barley	plastid	77.82	70.92
KRH68993	Soybean	plastid	79.38	66.23
AT5G28450.1	Thale cress	plastid	43.58	64.74
AT1G19150.1	Thale cress	plastid	55.64	52.96
AT3G47470.1	Thale cress	plastid	46.3	47.41
AT1G45474.2	Thale cress	mitochondrion	39.69	39.84
AT3G54890.1	Thale cress	plastid	36.58	39.0
AT1G61520.1	Thale cress	plastid	40.47	38.1
AT1G15820.1	Thale cress	plastid	33.85	33.72
AT2G34420.1	Thale cress	plastid	34.63	33.58
AT1G29930.1	Thale cress	plastid	34.63	33.33
AT1G29920.1	Thale cress	plastid	34.63	33.33
AT1G29910.1	Thale cress	plastid	34.63	33.33
AT2G34430.1	Thale cress	plastid	33.85	32.71
AT2G05070.1	Thale cress	plastid	32.68	31.7
AT5G54270.1	Thale cress	plastid	32.3	31.32
AT2G40100.1	Thale cress	plastid	32.68	30.43
AT4G10340.1	Thale cress	plastid	33.07	30.36
AT5G01530.1	Thale cress	plastid	34.24	30.34
AT3G08940.2	Thale cress	plastid	33.85	30.31
AT3G27690.2	Thale cress	golgi, plastid	32.3	27.85
AT1G76570.1	Thale cress	plastid	31.52	24.77
AT2G05100.2	Thale cress	plastid	28.79	23.34

Protein Annotations

MapMan:1.1.4.1.2	Gene3D:1.10.3460.10	EntrezGene:825320	ProteinID:AEE80209.1	EMBL:AF134120	ArrayExpress:AT3G61470
EnsemblPlantsGene:AT3G61470	RefSeq:AT3G61470	TAIR:AT3G61470	RefSeq:AT3G61470-TAIR-G	EnsemblPlants:AT3G61470.1	TAIR:AT3G61470.1
EMBL:AY054670	EMBL:AY065429	EMBL:AY072483	EMBL:BT002070	ProteinID:CAB71077.1	InterPro:Chloro_AB-bd_pln
InterPro:Chloroa_b-bind	InterPro:Chlorophyll_a/b-bd_dom_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0006464	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009409	GO:GO:0009507	GO:GO:0009522	GO:GO:0009523
GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009628	GO:GO:0009644
GO:GO:0009645	GO:GO:0009765	GO:GO:0009768	GO:GO:0009941	GO:GO:0009987	GO:GO:0010287
GO:GO:0015979	GO:GO:0016020	GO:GO:0016021	GO:GO:0016168	GO:GO:0018298	GO:GO:0019538
GO:GO:0019904	GO:GO:0031409	GO:GO:0046872	InterPro:IPR023329	Symbol:LHCA2	RefSeq:NP_191706.2
PFAM:PF00504	PO:PO:0000293	PO:PO:0007131	PO:PO:0009025	PANTHER:PTHR21649	PANTHER:PTHR21649:SF57
UniProt:Q9SYW8	SUPFAM:SSF103511	UniParc:UPI00000ABFEB	SEG:seg	:	:

Description

LHCA2Photosystem I chlorophyll a/b-binding protein 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SYW8]

Coordinates

chr3:+:22745514..22747444

Molecular Weight (calculated)

27756.3 Da

IEP (calculated)

7.573

GRAVY (calculated)

-0.001

Length

257 amino acids

Sequence
(BLAST)

001: MASSLCASSA IAAISSPSFL GGKKLRLKKK LTVPAVSRPD ASVRAVAADP DRPIWFPGST PPEWLDGSLP GDFGFDPLGL SSDPDSLKWN VQAEIVHCRW
101: AMLGAAGIFI PEFLTKIGIL NTPSWYTAGE QEYFTDKTTL FVVELILIGW AEGRRWADII KPGSVNTDPV FPNNKLTGTD VGYPGGLWFD PLGWGSGSPA
201: KLKELRTKEI KNGRLAMLAV MGAWFQHIYT GTGPIDNLFA HLADPGHATI FAAFTPK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.