Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021909.1-P | Field mustard | cytosol, extracellular, plastid | 59.4 | 98.14 |
| CDX79562 | Canola | plastid | 96.62 | 96.62 |
| CDX84647 | Canola | plastid | 96.24 | 96.24 |
| CDY30369 | Canola | plastid | 54.89 | 96.05 |
| Bra022976.1-P | Field mustard | plastid | 95.86 | 95.86 |
| AT2G34420.1 | Thale cress | plastid | 95.49 | 95.85 |
| AT1G29930.1 | Thale cress | plastid | 95.86 | 95.51 |
| AT1G29910.1 | Thale cress | plastid | 95.49 | 95.13 |
| AT1G29920.1 | Thale cress | plastid | 95.49 | 95.13 |
| CDX90218 | Canola | plastid | 95.49 | 95.13 |
| CDY35271 | Canola | plastid | 95.49 | 95.13 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular, plastid | 47.37 | 94.74 |
| CDY26306 | Canola | plastid | 94.74 | 94.38 |
| CDY66768 | Canola | plastid | 94.74 | 94.38 |
| CDY43676 | Canola | plastid | 94.74 | 94.38 |
| CDY43198 | Canola | plastid | 94.74 | 94.38 |
| Bra030182.1-P | Field mustard | plastid | 94.74 | 94.38 |
| Bra010807.1-P | Field mustard | plastid | 93.98 | 93.63 |
| CDX99866 | Canola | plastid | 93.61 | 93.26 |
| CDX98158 | Canola | plastid | 93.61 | 93.26 |
| Bra030181.1-P | Field mustard | plastid | 92.86 | 92.51 |
| AT2G05070.1 | Thale cress | plastid | 74.06 | 74.34 |
| AT5G54270.1 | Thale cress | plastid | 67.67 | 67.92 |
| AT3G27690.2 | Thale cress | golgi, plastid | 74.44 | 66.44 |
| AT2G05100.2 | Thale cress | plastid | 66.92 | 56.15 |
| AT4G10340.1 | Thale cress | plastid | 42.48 | 40.36 |
| AT3G54890.1 | Thale cress | plastid | 34.59 | 38.17 |
| AT1G76570.1 | Thale cress | plastid | 42.11 | 34.25 |
| AT3G08940.2 | Thale cress | plastid | 36.84 | 34.15 |
| AT3G47470.1 | Thale cress | plastid | 31.95 | 33.86 |
| AT3G61470.1 | Thale cress | plastid | 32.71 | 33.85 |
| AT5G01530.1 | Thale cress | plastid | 36.84 | 33.79 |
| AT1G19150.1 | Thale cress | plastid | 34.21 | 33.7 |
| AT1G61520.1 | Thale cress | plastid | 33.83 | 32.97 |
| AT1G45474.2 | Thale cress | mitochondrion | 30.08 | 31.25 |
| AT1G15820.1 | Thale cress | plastid | 29.32 | 30.23 |
| AT2G40100.1 | Thale cress | plastid | 31.2 | 30.07 |
| AT5G28450.1 | Thale cress | plastid | 19.17 | 29.48 |
Protein Annotations
| MapMan:1.1.1.1.1 | Gene3D:1.10.3460.10 | EntrezGene:818006 | ProteinID:AAC26709.1 | ProteinID:AAM14951.1 | ProteinID:AEC08973.1 |
| EMBL:AF326864 | EMBL:AF339687 | ArrayExpress:AT2G34430 | EnsemblPlantsGene:AT2G34430 | RefSeq:AT2G34430 | TAIR:AT2G34430 |
| RefSeq:AT2G34430-TAIR-G | EnsemblPlants:AT2G34430.1 | TAIR:AT2G34430.1 | EMBL:AY120776 | EMBL:BT002103 | ProteinID:CAA45789.1 |
| InterPro:Chloro_AB-bd_pln | InterPro:Chloroa_b-bind | InterPro:Chlorophyll_a/b-bd_dom_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009416 | GO:GO:0009507 | GO:GO:0009522 | GO:GO:0009523 |
| GO:GO:0009534 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009628 | GO:GO:0009765 |
| GO:GO:0009768 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0010287 | GO:GO:0015979 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016168 | GO:GO:0018298 | GO:GO:0019538 | GO:GO:0019904 | GO:GO:0031409 |
| InterPro:IPR023329 | Symbol:LHB1B1 | RefSeq:NP_565787.1 | PFAM:PF00504 | PO:PO:0000005 | PO:PO:0000293 |
| PO:PO:0009006 | PO:PO:0009025 | PO:PO:0020030 | PANTHER:PTHR21649 | PANTHER:PTHR21649:SF55 | UniProt:Q39142 |
| SUPFAM:SSF103511 | UniParc:UPI00000AC1B9 | : | : | : | : |
Description
LHB1B1Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:Q39142]
Coordinates
chr2:+:14524607..14525918
Molecular Weight (calculated)
28171.5 Da
IEP (calculated)
4.918
GRAVY (calculated)
0.003
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASTMALSS PALTGKAVKL SPAASEVFGT GRITMRKASK PTGPSGSPWY GSDRVKYLGP FSGEPPSYLT GEFPGDYGWD TAGLSADPET FARNRELEVI
101: HSRWAMLGAL GCVFPELLAR NGVKFGEAVW FKAGSQIFSD GGLDYLGNPS LVHAQSILAI WATQVILMGA VEGYRVAGDG PLGEAEDLLY PGGSFDPLGL
201: ATDPEAFAEL KVKELKNGRL AMFSMFGFFV QAIVTGKGPL ENLADHLADP VNNNAWAFAT NFVPGK
101: HSRWAMLGAL GCVFPELLAR NGVKFGEAVW FKAGSQIFSD GGLDYLGNPS LVHAQSILAI WATQVILMGA VEGYRVAGDG PLGEAEDLLY PGGSFDPLGL
201: ATDPEAFAEL KVKELKNGRL AMFSMFGFFV QAIVTGKGPL ENLADHLADP VNNNAWAFAT NFVPGK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.