Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400037285 | Potato | extracellular, vacuole | 56.65 | 62.82 |
| Bra014433.1-P | Field mustard | plastid | 65.9 | 44.53 |
| CDX89120 | Canola | plastid | 65.9 | 44.53 |
| CDY43936 | Canola | plastid | 65.9 | 44.53 |
| AT3G61470.1 | Thale cress | plastid | 64.74 | 43.58 |
| Solyc10g006230.2.1 | Tomato | plastid | 66.47 | 42.59 |
| KRH06319 | Soybean | nucleus, plastid | 65.32 | 41.85 |
| Bra003451.1-P | Field mustard | plastid | 62.43 | 41.7 |
| Zm00001d006663_P001 | Maize | plastid | 62.43 | 41.54 |
| KXG36552 | Sorghum | plastid | 63.01 | 41.44 |
| Os07t0577600-01 | Rice | plastid | 63.01 | 41.44 |
| CDY51572 | Canola | plastid | 61.85 | 41.31 |
| TraesCS2A01G187200.1 | Wheat | plastid | 61.27 | 41.25 |
| TraesCS2B01G220100.1 | Wheat | golgi, plastid | 60.69 | 41.18 |
| TraesCS2D01G200700.1 | Wheat | plastid | 60.69 | 41.18 |
| VIT_01s0010g03620.t01 | Wine grape | plastid | 64.16 | 40.96 |
| Zm00001d021906_P001 | Maize | plastid | 63.01 | 40.37 |
| KRH47742 | Soybean | nucleus | 64.16 | 39.36 |
| HORVU2Hr1G036960.4 | Barley | plastid | 58.96 | 36.17 |
| GSMUA_Achr9P01470_001 | Banana | endoplasmic reticulum | 50.87 | 35.34 |
| KRH68993 | Soybean | plastid | 60.12 | 33.77 |
| GSMUA_Achr6P20660_001 | Banana | mitochondrion | 36.99 | 31.22 |
| AT1G19150.1 | Thale cress | plastid | 44.51 | 28.52 |
| AT3G47470.1 | Thale cress | plastid | 36.99 | 25.5 |
| AT3G54890.1 | Thale cress | plastid | 31.79 | 22.82 |
| AT1G45474.2 | Thale cress | mitochondrion | 31.79 | 21.48 |
| AT1G61520.1 | Thale cress | plastid | 32.95 | 20.88 |
| AT2G05070.1 | Thale cress | plastid | 31.21 | 20.38 |
| AT1G29910.1 | Thale cress | plastid | 31.21 | 20.22 |
| AT1G29920.1 | Thale cress | plastid | 31.21 | 20.22 |
| AT1G29930.1 | Thale cress | plastid | 31.21 | 20.22 |
| AT2G34420.1 | Thale cress | plastid | 30.64 | 20.0 |
| AT2G34430.1 | Thale cress | plastid | 29.48 | 19.17 |
| AT5G54270.1 | Thale cress | plastid | 28.9 | 18.87 |
| AT3G27690.2 | Thale cress | golgi, plastid | 31.21 | 18.12 |
| AT5G01530.1 | Thale cress | plastid | 28.9 | 17.24 |
| AT4G10340.1 | Thale cress | plastid | 27.17 | 16.79 |
| AT3G08940.2 | Thale cress | plastid | 27.75 | 16.72 |
| AT1G15820.1 | Thale cress | plastid | 24.28 | 16.28 |
| AT2G40100.1 | Thale cress | plastid | 24.28 | 15.22 |
| AT1G76570.1 | Thale cress | plastid | 28.32 | 14.98 |
| AT2G05100.2 | Thale cress | plastid | 24.86 | 13.56 |
Protein Annotations
| Gene3D:1.10.3460.10 | MapMan:35.1 | EntrezGene:832932 | ProteinID:AED93800.1 | ArrayExpress:AT5G28450 | EnsemblPlantsGene:AT5G28450 |
| RefSeq:AT5G28450 | TAIR:AT5G28450 | RefSeq:AT5G28450-TAIR-G | EnsemblPlants:AT5G28450.1 | TAIR:AT5G28450.1 | InterPro:Chloro_AB-bd_pln |
| InterPro:Chloroa_b-bind | InterPro:Chlorophyll_a/b-bd_dom_sf | UniProt:F4K8I1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009522 | GO:GO:0009523 | GO:GO:0009535 | GO:GO:0009536 |
| GO:GO:0009579 | GO:GO:0009765 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016168 | GO:GO:0018298 | GO:GO:0019538 | InterPro:IPR023329 | RefSeq:NP_198197.1 | PFAM:PF00504 |
| PO:PO:0000293 | PANTHER:PTHR21649 | PANTHER:PTHR21649:SF57 | SUPFAM:SSF103511 | UniParc:UPI0000162641 | SEG:seg |
Description
Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:F4K8I1]
Coordinates
chr5:-:10372872..10374190
Molecular Weight (calculated)
18949.0 Da
IEP (calculated)
11.270
GRAVY (calculated)
-0.146
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MACLQLIANV FFSSSARLSR RSQDKPFSNL YPRSLVRSSE LALQLVSKII WLRVPLAGVR SRARSNGRKG RAPDIIKPGS VNTDPVFPNN KLTGTDIGYP
101: GGLWFDPLGW GSGSPTKIKE LRTKEIKNGR LAMLAVMGAW FQHIYTGTGP IDNLFAHLAD PGHATIFAAF TPK
101: GGLWFDPLGW GSGSPTKIKE LRTKEIKNGR LAMLAVMGAW FQHIYTGTGP IDNLFAHLAD PGHATIFAAF TPK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.