Factsheet for GSMUA_Achr9P01470_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 3
mitochondrion 3
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P20660_001	Banana	mitochondrion	75.5	91.71
PGSC0003DMT400037285	Potato	extracellular, vacuole	49.0	78.21
Solyc10g006230.2.1	Tomato	plastid	78.31	72.22
Bra014433.1-P	Field mustard	plastid	73.49	71.48
CDX89120	Canola	plastid	73.49	71.48
CDY43936	Canola	plastid	73.49	71.48
AT3G61470.1	Thale cress	plastid	73.09	70.82
KRH06319	Soybean	nucleus, plastid	76.71	70.74
TraesCS2D01G200700.1	Wheat	plastid	72.29	70.59
TraesCS2B01G220100.1	Wheat	golgi, plastid	72.29	70.59
TraesCS2A01G187200.1	Wheat	plastid	72.69	70.43
Os07t0577600-01	Rice	plastid	74.3	70.34
VIT_01s0010g03620.t01	Wine grape	plastid	75.9	69.74
Zm00001d006663_P001	Maize	plastid	72.29	69.23
KXG36552	Sorghum	plastid	72.69	68.82
KRH47742	Soybean	nucleus	77.51	68.44
Bra003451.1-P	Field mustard	plastid	71.08	68.34
CDY51572	Canola	plastid	70.68	67.95
Zm00001d021906_P001	Maize	plastid	71.49	65.93
HORVU2Hr1G036960.4	Barley	plastid	70.68	62.41
KRH68993	Soybean	plastid	72.69	58.77
AT5G28450.1	Thale cress	plastid	35.34	50.87
GSMUA_Achr9P18200_001	Banana	plastid	24.9	45.26
GSMUA_Achr2P14960_001	Banana	plastid	44.18	43.82
GSMUA_Achr4P24090_001	Banana	unclear	41.77	41.27
GSMUA_Achr5P09230_001	Banana	cytosol, extracellular, plastid	19.68	36.84
GSMUA_Achr10P...	Banana	cytosol, extracellular, plastid	19.68	36.84
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	14.06	36.84
GSMUA_Achr7P13020_001	Banana	plastid	40.16	36.76
GSMUA_Achr2P06350_001	Banana	unclear	32.53	33.61
GSMUA_Achr3P04110_001	Banana	plastid	36.95	33.58
GSMUA_Achr6P31940_001	Banana	plastid	31.73	32.78
GSMUA_Achr4P07890_001	Banana	plastid	20.48	32.08
GSMUA_Achr9P02810_001	Banana	plastid	30.12	30.86
GSMUA_Achr8P03720_001	Banana	plasma membrane, plastid, unclear	30.12	30.61
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	17.67	30.14
GSMUA_Achr2P09300_001	Banana	plasma membrane, plastid, unclear	32.13	29.96
GSMUA_Achr4P33040_001	Banana	plastid, unclear	30.12	28.41
GSMUA_AchrUn_...	Banana	plastid	26.1	28.14
GSMUA_Achr1P08770_001	Banana	plastid, unclear	26.1	26.97
GSMUA_Achr6P12670_001	Banana	plasma membrane	29.72	26.52
GSMUA_Achr3P02780_001	Banana	plastid	30.12	25.86
GSMUA_Achr10P...	Banana	plastid	28.92	25.0
GSMUA_Achr9P27480_001	Banana	mitochondrion	30.52	23.6
GSMUA_Achr10P...	Banana	unclear	12.85	21.48

Protein Annotations

Gene3D:1.10.3460.10	MapMan:35.1	InterPro:Chloro_AB-bd_pln	InterPro:Chloroa_b-bind	InterPro:Chlorophyll_a/b-bd_dom_sf	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009522	GO:GO:0009523
GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009765	GO:GO:0009987	GO:GO:0015979
GO:GO:0016020	GO:GO:0016021	GO:GO:0016168	GO:GO:0018298	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr9G01470_001
EnsemblPlants:GSMUA_Achr9P01470_001	EnsemblPlants:GSMUA_Achr9T01470_001	InterPro:IPR023329	UniProt:M0TWK4	PFAM:PF00504	PANTHER:PTHR21649
PANTHER:PTHR21649:SF57	SUPFAM:SSF103511	SignalP:SignalP-noTM	UniParc:UPI000295DC35	SEG:seg	:

Description

Chlorophyll a-b binding protein 7, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr9G01470_001]

Coordinates

chr9:-:1101617..1102901

Molecular Weight (calculated)

27309.0 Da

IEP (calculated)

9.616

GRAVY (calculated)

0.004

Length

249 amino acids

Sequence
(BLAST)

001: MFCKNVHIFH AVLLWICFRS RKNGAAAVAA TKASFLGGRK LRQGKRAARA QTARRELSVS AAAAPERPLW FPGSTPPPWL DGSLPGDFGF DPLGLGSDPE
101: SLRWNQQAEI VHCRWAMLGA AGIFIPELLT KIGILNTPSW YTAGQLQYFT DTTTLFVIEL ILIGWAEGRR WADIIKPGCV NTDPIFPNNK LTGTDELRTK
201: EIKNGRLAML AVMGAWFQAI YTGTGPIDNL FAHLADPGHA TVFSAFTPN

Best Arabidopsis Sequence Match ( AT3G61470.1 )
(BLAST)

001: MASSLCASSA IAAISSPSFL GGKKLRLKKK LTVPAVSRPD ASVRAVAADP DRPIWFPGST PPEWLDGSLP GDFGFDPLGL SSDPDSLKWN VQAEIVHCRW
101: AMLGAAGIFI PEFLTKIGIL NTPSWYTAGE QEYFTDKTTL FVVELILIGW AEGRRWADII KPGSVNTDPV FPNNKLTGTD VGYPGGLWFD PLGWGSGSPA
201: KLKELRTKEI KNGRLAMLAV MGAWFQHIYT GTGPIDNLFA HLADPGHATI FAAFTPK

Arabidopsis Description

LHCA2Photosystem I chlorophyll a/b-binding protein 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SYW8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.