Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P09230_001 | Banana | cytosol, extracellular, plastid | 66.04 | 78.95 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular, plastid | 65.41 | 78.2 |
| PGSC0003DMT400035006 | Potato | cytosol, extracellular, vacuole | 64.15 | 63.75 |
| PGSC0003DMT400035007 | Potato | cytosol, extracellular, vacuole | 64.15 | 63.75 |
| TraesCS6B01G122500.1 | Wheat | cytosol, extracellular, plastid | 60.38 | 60.0 |
| TraesCS1B01G317500.1 | Wheat | plastid | 56.6 | 58.82 |
| GSMUA_Achr2P09300_001 | Banana | plasma membrane, plastid, unclear | 90.57 | 53.93 |
| VIT_10s0003g02890.t01 | Wine grape | plastid | 89.31 | 53.79 |
| VIT_10s0003g02900.t01 | Wine grape | plastid | 88.68 | 53.41 |
| TraesCS1D01G375000.1 | Wheat | plastid | 79.87 | 53.14 |
| TraesCS6D01G088700.1 | Wheat | plastid | 75.47 | 52.17 |
| Os01t0720500-01 | Rice | plastid | 86.79 | 52.08 |
| TraesCS5D01G464700.1 | Wheat | plastid | 85.53 | 51.13 |
| TraesCS5B01G463100.1 | Wheat | plastid | 84.91 | 50.75 |
| Zm00001d011285_P001 | Maize | plastid | 83.65 | 50.38 |
| TraesCS5B01G463000.1 | Wheat | plastid | 84.28 | 50.38 |
| TraesCS5A01G454300.1 | Wheat | plastid | 84.28 | 50.38 |
| TraesCS5B01G462800.1 | Wheat | plastid | 84.28 | 50.38 |
| EES01022 | Sorghum | plastid | 83.65 | 50.19 |
| TraesCS5D01G464800.1 | Wheat | plastid | 83.65 | 50.0 |
| TraesCS5D01G464900.1 | Wheat | plastid | 83.65 | 50.0 |
| OQU87124 | Sorghum | plastid | 83.02 | 50.0 |
| TraesCS5A01G454200.1 | Wheat | plastid | 83.02 | 49.62 |
| TraesCS1D01G411600.1 | Wheat | plastid | 83.02 | 49.62 |
| TraesCS1B01G433300.1 | Wheat | plastid | 83.02 | 49.62 |
| TraesCS1B01G432700.1 | Wheat | plastid | 83.02 | 49.62 |
| TraesCS1A01G403300.1 | Wheat | plastid | 83.02 | 49.62 |
| TraesCS6D01G088800.1 | Wheat | plastid | 83.02 | 49.62 |
| Zm00001d044399_P001 | Maize | plastid | 82.39 | 49.62 |
| Zm00001d044401_P001 | Maize | plastid | 82.39 | 49.62 |
| Zm00001d044402_P001 | Maize | plastid | 82.39 | 49.62 |
| TraesCS5D01G357600.1 | Wheat | plastid | 82.39 | 49.43 |
| TraesCS5A01G350600.1 | Wheat | plastid | 82.39 | 49.43 |
| TraesCS6A01G093700.1 | Wheat | plastid | 82.39 | 49.25 |
| TraesCS1A01G403800.1 | Wheat | plastid | 82.39 | 49.25 |
| TraesCS6B01G122800.1 | Wheat | plastid | 82.39 | 49.25 |
| TraesCSU01G250000.1 | Wheat | plastid | 82.39 | 49.25 |
| TraesCS1D01G411300.1 | Wheat | plastid | 82.39 | 49.25 |
| Zm00001d044396_P001 | Maize | plastid | 81.76 | 49.24 |
| TraesCS5B01G353200.1 | Wheat | plastid | 81.76 | 49.06 |
| TraesCSU01G167700.1 | Wheat | plastid | 81.13 | 48.68 |
| TraesCS5B01G462900.1 | Wheat | plastid | 62.26 | 48.53 |
| TraesCS7B01G103300.1 | Wheat | plastid | 81.13 | 48.5 |
| TraesCS7D01G199400.1 | Wheat | plastid | 81.13 | 48.5 |
| TraesCS6A01G094300.1 | Wheat | plastid | 81.13 | 48.5 |
| TraesCS6D01G088600.1 | Wheat | plastid | 81.13 | 48.5 |
| TraesCS1D01G375100.1 | Wheat | plastid | 80.5 | 48.3 |
| TraesCS1D01G374900.1 | Wheat | plastid | 80.5 | 48.3 |
| TraesCS6A01G094100.1 | Wheat | plastid | 80.5 | 48.12 |
| TraesCS7A01G238400.1 | Wheat | plastid | 80.5 | 48.12 |
| TraesCS1B01G388300.1 | Wheat | plastid | 79.87 | 47.92 |
| TraesCS1B01G388200.1 | Wheat | plastid | 79.87 | 47.92 |
| TraesCS7B01G103400.1 | Wheat | plastid | 79.87 | 47.74 |
| TraesCS6A01G094600.1 | Wheat | plastid | 76.73 | 47.66 |
| TraesCS1B01G388500.1 | Wheat | plastid | 79.25 | 47.55 |
| TraesCS7D01G199500.1 | Wheat | plastid | 78.62 | 46.99 |
| TraesCS7A01G237100.1 | Wheat | plastid | 77.99 | 46.62 |
| TraesCS6B01G122600.1 | Wheat | plastid | 77.36 | 46.24 |
| TraesCS6B01G122700.1 | Wheat | mitochondrion, plastid | 60.38 | 45.28 |
| PGSC0003DMT400034902 | Potato | plastid | 36.48 | 44.27 |
| TraesCS6A01G094500.1 | Wheat | plastid | 82.39 | 42.95 |
| GSMUA_Achr4P33040_001 | Banana | plastid, unclear | 69.81 | 42.05 |
| TraesCS6A01G094200.1 | Wheat | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 81.13 | 39.45 |
| TraesCS6A01G094400.1 | Wheat | plastid | 82.39 | 39.34 |
| GSMUA_AchrUn_... | Banana | plastid | 55.35 | 38.1 |
| GSMUA_Achr1P08770_001 | Banana | plastid, unclear | 55.97 | 36.93 |
| TraesCS1D01G375200.1 | Wheat | plastid | 33.96 | 35.06 |
| HORVU1Hr1G088930.2 | Barley | endoplasmic reticulum | 22.64 | 30.51 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 23.27 | 25.34 |
| GSMUA_Achr6P20660_001 | Banana | mitochondrion | 31.45 | 24.39 |
| KXG33266 | Sorghum | extracellular | 32.08 | 22.08 |
| GSMUA_Achr6P12670_001 | Banana | plasma membrane | 38.36 | 21.86 |
| GSMUA_Achr3P02780_001 | Banana | plastid | 38.99 | 21.38 |
| GSMUA_Achr10P... | Banana | plastid | 37.74 | 20.83 |
| GSMUA_Achr9P01470_001 | Banana | endoplasmic reticulum | 32.08 | 20.48 |
| GSMUA_Achr8P03720_001 | Banana | plasma membrane, plastid, unclear | 31.45 | 20.41 |
| GSMUA_Achr6P31940_001 | Banana | plastid | 30.19 | 19.92 |
| GSMUA_Achr2P06350_001 | Banana | unclear | 29.56 | 19.5 |
| GSMUA_Achr2P14960_001 | Banana | plastid | 30.19 | 19.12 |
| GSMUA_Achr9P02810_001 | Banana | plastid | 28.93 | 18.93 |
| GSMUA_Achr7P13020_001 | Banana | plastid | 32.08 | 18.75 |
| GSMUA_Achr4P24090_001 | Banana | unclear | 28.93 | 18.25 |
| GSMUA_Achr9P27480_001 | Banana | mitochondrion | 35.85 | 17.7 |
| GSMUA_Achr3P04110_001 | Banana | plastid | 30.19 | 17.52 |
| GSMUA_Achr10P... | Banana | unclear | 16.35 | 17.45 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 10.06 | 16.84 |
| GSMUA_Achr9P18200_001 | Banana | plastid | 11.95 | 13.87 |
Protein Annotations
| Gene3D:1.10.3460.10 | MapMan:35.1 | InterPro:Chloro_AB-bd_pln | InterPro:Chloroa_b-bind | InterPro:Chlorophyll_a/b-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009522 | GO:GO:0009523 |
| GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009765 | GO:GO:0009987 | GO:GO:0015979 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016168 | GO:GO:0018298 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr4G07890_001 |
| EnsemblPlants:GSMUA_Achr4P07890_001 | EnsemblPlants:GSMUA_Achr4T07890_001 | InterPro:IPR023329 | UniProt:M0SM06 | PFAM:PF00504 | PANTHER:PTHR21649 |
| PANTHER:PTHR21649:SF56 | SUPFAM:SSF103511 | UniParc:UPI0002969255 | : | : | : |
Description
Chlorophyll a-b binding protein 21, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr4G07890_001]
Coordinates
chr4:-:5869164..5870147
Molecular Weight (calculated)
16559.4 Da
IEP (calculated)
9.966
GRAVY (calculated)
0.316
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTMALSSP SLAGKAVKFG PSVADVLGGG RVTMRKTGAK PKSAPSGSPW WAMLGALGCV FPELLSRNGV KFGEAVCILA IWACQVILMG AVEGYRIAGG
101: PLGEVKEIKN GRLAMFSMFG FFVQAIVTGK GPLENLADHL ADPVNNNAWA YATNFVPGK
101: PLGEVKEIKN GRLAMFSMFG FFVQAIVTGK GPLENLADHL ADPVNNNAWA YATNFVPGK
001: MAASTMALSS PAFAGKAVNL SPAASEVLGS GRVTMRKTVA KPKGPSGSPW YGSDRVKYLG PFSGESPSYL TGEFPGDYGW DTAGLSADPE TFARNRELEV
101: IHSRWAMLGA LGCVFPELLA RNGVKFGEAV WFKAGSQIFS DGGLDYLGNP SLVHAQSILA IWATQVILMG AVEGYRVAGN GPLGEAEDLL YPGGSFDPLG
201: LATDPEAFAE LKVKELKNGR LAMFSMFGFF VQAIVTGKGP IENLADHLAD PVNNNAWAFA TNFVPGK
101: IHSRWAMLGA LGCVFPELLA RNGVKFGEAV WFKAGSQIFS DGGLDYLGNP SLVHAQSILA IWATQVILMG AVEGYRVAGN GPLGEAEDLL YPGGSFDPLG
201: LATDPEAFAE LKVKELKNGR LAMFSMFGFF VQAIVTGKGP IENLADHLAD PVNNNAWAFA TNFVPGK
Arabidopsis Description
LHCB1.1Chlorophyll a-b binding protein 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ87]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.