Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021909.1-P | Field mustard | cytosol, extracellular, plastid | 59.62 | 98.14 |
| AT1G29930.1 | Thale cress | plastid | 98.11 | 97.38 |
| CDY35271 | Canola | plastid | 97.74 | 97.0 |
| AT1G29910.1 | Thale cress | plastid | 97.74 | 97.0 |
| AT1G29920.1 | Thale cress | plastid | 97.74 | 97.0 |
| CDY26306 | Canola | plastid | 97.74 | 97.0 |
| CDX90218 | Canola | plastid | 97.74 | 97.0 |
| CDY66768 | Canola | plastid | 96.98 | 96.25 |
| CDY43676 | Canola | plastid | 96.98 | 96.25 |
| Bra030182.1-P | Field mustard | plastid | 96.98 | 96.25 |
| CDY43198 | Canola | plastid | 96.98 | 96.25 |
| CDY30369 | Canola | plastid | 55.09 | 96.05 |
| CDX98158 | Canola | plastid | 96.6 | 95.88 |
| CDX99866 | Canola | plastid | 96.6 | 95.88 |
| Bra010807.1-P | Field mustard | plastid | 96.6 | 95.88 |
| AT2G34430.1 | Thale cress | plastid | 95.85 | 95.49 |
| CDX84647 | Canola | plastid | 95.85 | 95.49 |
| CDX79562 | Canola | plastid | 95.47 | 95.11 |
| Bra022976.1-P | Field mustard | plastid | 95.47 | 95.11 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular, plastid | 47.55 | 94.74 |
| Bra030181.1-P | Field mustard | plastid | 95.09 | 94.38 |
| AT2G05070.1 | Thale cress | plastid | 75.85 | 75.85 |
| AT5G54270.1 | Thale cress | plastid | 69.43 | 69.43 |
| AT3G27690.2 | Thale cress | golgi, plastid | 75.47 | 67.11 |
| AT2G05100.2 | Thale cress | plastid | 68.68 | 57.41 |
| AT4G10340.1 | Thale cress | plastid | 42.64 | 40.36 |
| AT3G54890.1 | Thale cress | plastid | 35.85 | 39.42 |
| AT3G61470.1 | Thale cress | plastid | 33.58 | 34.63 |
| AT3G47470.1 | Thale cress | plastid | 32.45 | 34.26 |
| AT1G76570.1 | Thale cress | plastid | 41.13 | 33.33 |
| AT5G01530.1 | Thale cress | plastid | 36.23 | 33.1 |
| AT3G08940.2 | Thale cress | plastid | 35.85 | 33.1 |
| AT1G19150.1 | Thale cress | plastid | 33.58 | 32.96 |
| AT1G61520.1 | Thale cress | plastid | 32.83 | 31.87 |
| AT1G45474.2 | Thale cress | mitochondrion | 29.81 | 30.86 |
| AT5G28450.1 | Thale cress | plastid | 20.0 | 30.64 |
| AT1G15820.1 | Thale cress | plastid | 29.43 | 30.23 |
| AT2G40100.1 | Thale cress | plastid | 30.94 | 29.71 |
Protein Annotations
| MapMan:1.1.1.1.1 | Gene3D:1.10.3460.10 | EntrezGene:818005 | UniProt:A0A178VRB0 | ProteinID:AAC26710.1 | ProteinID:AAM14954.1 |
| ProteinID:AEC08972.1 | EMBL:AF372886 | EMBL:AF419548 | EMBL:AF419587 | EMBL:AF428397 | EMBL:AK229627 |
| ArrayExpress:AT2G34420 | EnsemblPlantsGene:AT2G34420 | RefSeq:AT2G34420 | TAIR:AT2G34420 | RefSeq:AT2G34420-TAIR-G | EnsemblPlants:AT2G34420.1 |
| TAIR:AT2G34420.1 | EMBL:AY039561 | EMBL:AY045806 | EMBL:AY065125 | EMBL:AY079101 | EMBL:AY079110 |
| EMBL:AY081587 | EMBL:AY142513 | ProteinID:CAA45790.1 | InterPro:Chloro_AB-bd_pln | InterPro:Chloroa_b-bind | InterPro:Chlorophyll_a/b-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006091 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009416 |
| GO:GO:0009507 | GO:GO:0009522 | GO:GO:0009523 | GO:GO:0009534 | GO:GO:0009535 | GO:GO:0009536 |
| GO:GO:0009579 | GO:GO:0009628 | GO:GO:0009765 | GO:GO:0009768 | GO:GO:0009941 | GO:GO:0009987 |
| GO:GO:0010287 | GO:GO:0015979 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016168 | GO:GO:0018298 |
| GO:GO:0019538 | GO:GO:0019904 | GO:GO:0031409 | InterPro:IPR023329 | Symbol:LHB1B2 | RefSeq:NP_565786.1 |
| ProteinID:OAP07675.1 | PFAM:PF00504 | PO:PO:0000005 | PO:PO:0000293 | PO:PO:0001170 | PO:PO:0006339 |
| PO:PO:0009025 | PO:PO:0020030 | PANTHER:PTHR21649 | PANTHER:PTHR21649:SF55 | UniProt:Q39141 | SUPFAM:SSF103511 |
| UniParc:UPI00000AC5D7 | : | : | : | : | : |
Description
LHB1B2Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:Q39141]
Coordinates
chr2:-:14522524..14523568
Molecular Weight (calculated)
28055.4 Da
IEP (calculated)
5.091
GRAVY (calculated)
-0.006
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSTMALSS PAFAGKAVKP AASDVLGSGR VTMRKTVAKP KGPSGSPWYG SDRVKYLGPF SGEPPSYLTG EFPGDYGWDT AGLSADPETF ARNRELEVIH
101: SRWAMLGALG CVFPELLARN GVKFGEAVWF KAGSQIFSDG GLDYLGNPSL VHAQSILAIW ATQVILMGAV EGYRVAGDGP LGEAEDLLYP GGSFDPLGLA
201: TDPEAFAELK VKELKNGRLA MFSMFGFFVQ AIVTGKGPLE NLADHLADPV NNNAWAFATN FVPGK
101: SRWAMLGALG CVFPELLARN GVKFGEAVWF KAGSQIFSDG GLDYLGNPSL VHAQSILAIW ATQVILMGAV EGYRVAGDGP LGEAEDLLYP GGSFDPLGLA
201: TDPEAFAELK VKELKNGRLA MFSMFGFFVQ AIVTGKGPLE NLADHLADPV NNNAWAFATN FVPGK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.