Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G219100.1 | Wheat | plastid | 91.58 | 94.91 |
| TraesCS5A01G213000.1 | Wheat | plastid | 90.88 | 94.87 |
| TraesCS5B01G210800.2 | Wheat | cytosol, plastid | 74.74 | 89.5 |
| Zm00001d005814_P002 | Maize | plastid | 75.44 | 79.34 |
| Os09t0439500-01 | Rice | plastid | 73.33 | 79.17 |
| KXG35708 | Sorghum | plastid | 75.44 | 78.18 |
| Solyc12g009200.1.1 | Tomato | nucleus, plastid | 64.91 | 71.15 |
| KRH12566 | Soybean | plastid | 64.91 | 71.15 |
| PGSC0003DMT400007514 | Potato | plastid | 64.56 | 70.77 |
| KRH37524 | Soybean | plastid | 64.56 | 70.77 |
| VIT_11s0016g00730.t01 | Wine grape | plastid | 64.21 | 70.66 |
| CDX83783 | Canola | plastid | 61.75 | 66.17 |
| Bra016522.1-P | Field mustard | plastid | 61.4 | 65.79 |
| CDX96677 | Canola | plastid | 61.4 | 65.79 |
| AT1G19150.1 | Thale cress | plastid | 61.05 | 64.44 |
| GSMUA_Achr9P18200_001 | Banana | plastid | 29.82 | 62.04 |
| HORVU2Hr1G036960.4 | Barley | plastid | 50.53 | 51.06 |
| HORVU5Hr1G066280.1 | Barley | plastid | 38.6 | 44.9 |
| HORVU2Hr1G041270.2 | Barley | endoplasmic reticulum, plastid | 15.44 | 36.67 |
| HORVU1Hr1G078380.1 | Barley | plastid | 31.23 | 33.58 |
| HORVU1Hr1G088880.1 | Barley | plastid | 30.88 | 33.08 |
| HORVU6Hr1G016880.1 | Barley | plastid | 30.53 | 32.71 |
| HORVU6Hr1G091660.1 | Barley | plastid | 30.53 | 32.71 |
| HORVU5Hr1G109250.1 | Barley | plastid | 30.18 | 32.33 |
| HORVU6Hr1G016850.1 | Barley | plastid | 30.18 | 32.33 |
| HORVU7Hr1G040370.1 | Barley | plastid | 30.18 | 32.33 |
| HORVU1Hr1G088900.1 | Barley | plastid | 29.82 | 31.95 |
| HORVU5Hr1G087250.1 | Barley | plastid | 29.82 | 31.95 |
| HORVU5Hr1G124160.1 | Barley | plastid | 29.82 | 31.95 |
| HORVU2Hr1G040780.7 | Barley | plastid | 29.47 | 30.88 |
| HORVU6Hr1G091650.1 | Barley | plastid | 30.53 | 30.63 |
| HORVU1Hr1G088870.2 | Barley | plastid | 30.88 | 30.45 |
| HORVU6Hr1G016890.6 | Barley | plastid | 30.53 | 30.0 |
| HORVU7Hr1G046320.2 | Barley | plastid | 29.82 | 29.82 |
| HORVU2Hr1G079920.1 | Barley | cytosol, mitochondrion, plastid | 30.18 | 29.35 |
| HORVU1Hr1G088920.3 | Barley | plastid | 30.18 | 29.05 |
| HORVU2Hr1G079910.1 | Barley | cytosol | 19.65 | 27.59 |
| HORVU1Hr1G089180.1 | Barley | plastid | 30.53 | 27.44 |
| HORVU7Hr1G040380.1 | Barley | plastid | 29.47 | 26.92 |
| HORVU5Hr1G109360.1 | Barley | plastid | 30.53 | 26.85 |
| HORVU5Hr1G109260.4 | Barley | plastid | 30.53 | 26.85 |
| HORVU5Hr1G054000.1 | Barley | mitochondrion, plastid | 28.07 | 25.81 |
| HORVU7Hr1G058120.1 | Barley | plastid | 29.82 | 25.6 |
| HORVU1Hr1G088930.2 | Barley | endoplasmic reticulum | 9.82 | 23.73 |
| HORVU4Hr1G015260.2 | Barley | plastid | 23.51 | 23.26 |
| HORVU5Hr1G082420.1 | Barley | plastid | 27.02 | 22.45 |
| HORVU5Hr1G013200.1 | Barley | plastid | 22.11 | 22.26 |
Protein Annotations
| MapMan:1.1.4.1.6 | Gene3D:1.10.3460.10 | UniProt:A0A287RHB1 | InterPro:Chloro_AB-bd_pln | InterPro:Chloroa_b-bind | InterPro:Chlorophyll_a/b-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006091 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009522 |
| GO:GO:0009523 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009628 | GO:GO:0009637 |
| GO:GO:0009765 | GO:GO:0009768 | GO:GO:0009987 | GO:GO:0010114 | GO:GO:0010218 | GO:GO:0015979 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016168 | GO:GO:0018298 | GO:GO:0019538 | EnsemblPlantsGene:HORVU5Hr1G062240 |
| EnsemblPlants:HORVU5Hr1G062240.1 | InterPro:IPR023329 | PFAM:PF00504 | PANTHER:PTHR21649 | PANTHER:PTHR21649:SF5 | SUPFAM:SSF103511 |
| UniParc:UPI000B4620B1 | SEG:seg | : | : | : | : |
Description
Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A287RHB1]
Coordinates
chrchr5H:+:484376487..484378151
Molecular Weight (calculated)
31179.3 Da
IEP (calculated)
7.113
GRAVY (calculated)
-0.122
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: GRSAISAPLS IPMATPLPTG SFAACSLRPS IRALHASKPP LQTAGAAAAA CAPVRRGGSH RTGATKSSLS TVCEPLGPDR PVWFPGTAPP PWLDGSLPGD
101: FGFDPLGFGS EPESLRWFAQ AELMHGRWAM LAVAGILIPE ILQKWGFMEE FSWYTAGERE YFADPWTLFV TQMALMGWVE GRRWMDYLNP GSVDIEPRFP
201: NRKNPTPDVG YPGGLWFDWG NWGRGSPEPV MVLRTKEIKN GRLAMLAFVG FWFQAVYTGQ GPLDNLFAHL ADPGHCNIFS AFTSH
101: FGFDPLGFGS EPESLRWFAQ AELMHGRWAM LAVAGILIPE ILQKWGFMEE FSWYTAGERE YFADPWTLFV TQMALMGWVE GRRWMDYLNP GSVDIEPRFP
201: NRKNPTPDVG YPGGLWFDWG NWGRGSPEPV MVLRTKEIKN GRLAMLAFVG FWFQAVYTGQ GPLDNLFAHL ADPGHCNIFS AFTSH
001: MAFAIASALT STLTLSTSRV QNPTQRRPHV ASTSSTGGRL MRERLVVVRA GKEVSSVCEP LPPDRPLWFP GSSPPEWLDG SLPGDFGFDP LGLGSDPDTL
101: KWFAQAELIH SRWAMLAVTG IIIPECLERL GFIENFSWYD AGSREYFADS TTLFVAQMVL MGWAEGRRWA DLIKPGSVDI EPKYPHKVNP KPDVGYPGGL
201: WFDFMMWGRG SPEPVMVLRT KEIKNGRLAM LAFLGFCFQA TYTSQDPIEN LMAHLADPGH CNVFSAFTSH
101: KWFAQAELIH SRWAMLAVTG IIIPECLERL GFIENFSWYD AGSREYFADS TTLFVAQMVL MGWAEGRRWA DLIKPGSVDI EPKYPHKVNP KPDVGYPGGL
201: WFDFMMWGRG SPEPVMVLRT KEIKNGRLAM LAFLGFCFQA TYTSQDPIEN LMAHLADPGH CNVFSAFTSH
Arabidopsis Description
LHCA6Photosystem I chlorophyll a/b-binding protein 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LCQ4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.