Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra016522.1-P | Field mustard | plastid | 98.87 | 98.87 |
CDX83783 | Canola | plastid | 97.37 | 97.37 |
AT1G19150.1 | Thale cress | plastid | 86.84 | 85.56 |
VIT_11s0016g00730.t01 | Wine grape | plastid | 75.19 | 77.22 |
PGSC0003DMT400007514 | Potato | plastid | 75.19 | 76.92 |
Solyc12g009200.1.1 | Tomato | nucleus, plastid | 74.81 | 76.54 |
KRH37524 | Soybean | plastid | 73.68 | 75.38 |
KRH12566 | Soybean | plastid | 72.93 | 74.62 |
GSMUA_Achr9P18200_001 | Banana | plastid | 35.34 | 68.61 |
Os09t0439500-01 | Rice | plastid | 67.67 | 68.18 |
TraesCS5B01G210800.2 | Wheat | cytosol, plastid | 60.9 | 68.07 |
Zm00001d005814_P002 | Maize | plastid | 66.54 | 65.31 |
KXG35708 | Sorghum | plastid | 66.17 | 64.0 |
TraesCS5A01G213000.1 | Wheat | plastid | 65.41 | 63.74 |
TraesCS5D01G219100.1 | Wheat | plastid | 65.41 | 63.27 |
HORVU5Hr1G062240.1 | Barley | plastid | 65.79 | 61.4 |
CDY43936 | Canola | plastid | 54.14 | 56.25 |
CDX89120 | Canola | plastid | 53.76 | 55.86 |
CDY51572 | Canola | plastid | 53.76 | 55.21 |
CDY47410 | Canola | plastid | 39.85 | 42.06 |
CDX99044 | Canola | plastid | 39.85 | 42.06 |
CDX67613 | Canola | plastid | 33.83 | 37.34 |
CDY07517 | Canola | plastid | 33.83 | 37.34 |
CDX78277 | Canola | plastid | 33.83 | 37.34 |
CDX73435 | Canola | plastid | 33.83 | 37.34 |
CDY17055 | Canola | mitochondrion, plastid | 35.34 | 36.43 |
CDY43213 | Canola | mitochondrion, plastid | 35.34 | 36.43 |
CDY12903 | Canola | plastid | 36.84 | 36.16 |
CDY03835 | Canola | plastid | 36.84 | 35.9 |
CDY47581 | Canola | plastid | 36.84 | 35.9 |
CDY15020 | Canola | plastid | 36.47 | 35.79 |
CDY57375 | Canola | plastid | 36.47 | 35.79 |
CDY26347 | Canola | plastid | 34.21 | 35.69 |
CDY33376 | Canola | plastid | 34.59 | 35.66 |
CDY35042 | Canola | plastid | 34.21 | 35.27 |
CDX96833 | Canola | plastid | 34.21 | 35.14 |
CDX81735 | Canola | plastid | 34.21 | 35.14 |
CDX83967 | Canola | extracellular, vacuole | 3.01 | 34.78 |
CDY52865 | Canola | plastid | 33.83 | 34.75 |
CDY30369 | Canola | plastid | 19.55 | 34.21 |
CDY66572 | Canola | cytosol, extracellular, plastid | 18.05 | 33.57 |
CDX84316 | Canola | plastid | 33.46 | 33.46 |
CDX79562 | Canola | plastid | 33.46 | 33.46 |
CDY17247 | Canola | plastid | 33.46 | 33.46 |
CDX84647 | Canola | plastid | 33.08 | 33.08 |
CDY17248 | Canola | plastid | 33.08 | 33.08 |
CDX90218 | Canola | plastid | 33.08 | 32.96 |
CDY35271 | Canola | plastid | 33.08 | 32.96 |
CDY26306 | Canola | plastid | 33.08 | 32.96 |
CDY43676 | Canola | plastid | 33.08 | 32.96 |
CDY66768 | Canola | plastid | 33.08 | 32.96 |
CDX99866 | Canola | plastid | 33.08 | 32.96 |
CDY43198 | Canola | plastid | 32.71 | 32.58 |
CDX98158 | Canola | plastid | 32.71 | 32.58 |
CDY15050 | Canola | plastid | 31.58 | 31.7 |
CDX93077 | Canola | plastid | 31.58 | 31.7 |
CDY17250 | Canola | mitochondrion, plastid | 19.17 | 31.29 |
CDY00149 | Canola | plastid | 31.2 | 31.2 |
CDY20039 | Canola | plastid | 30.83 | 30.94 |
CDY49770 | Canola | plastid | 30.83 | 30.83 |
CDX83726 | Canola | plastid | 30.83 | 30.83 |
CDY13732 | Canola | plastid | 30.83 | 30.83 |
CDX83966 | Canola | plastid | 26.32 | 30.7 |
CDY03989 | Canola | plastid | 30.45 | 30.45 |
CDY53084 | Canola | plastid | 32.71 | 30.1 |
CDY20518 | Canola | plastid | 31.2 | 30.07 |
CDX74808 | Canola | plastid | 31.2 | 30.07 |
CDY04834 | Canola | plastid | 32.33 | 29.97 |
CDY52238 | Canola | plastid | 26.32 | 29.91 |
CDY14320 | Canola | plastid | 26.32 | 29.91 |
CDY18320 | Canola | plastid | 26.32 | 29.91 |
CDY44667 | Canola | plastid | 32.33 | 29.86 |
CDX90755 | Canola | plastid | 30.08 | 28.57 |
CDY05098 | Canola | plastid | 29.7 | 28.21 |
CDY60092 | Canola | plastid | 29.7 | 28.11 |
CDX84315 | Canola | plastid | 33.46 | 27.05 |
CDX86864 | Canola | plastid | 19.92 | 25.36 |
CDY28778 | Canola | plastid | 24.06 | 25.0 |
CDY45980 | Canola | plastid | 29.7 | 24.38 |
CDY20401 | Canola | plastid | 29.7 | 24.16 |
CDY61708 | Canola | plastid | 22.56 | 17.14 |
Protein Annotations
MapMan:1.1.4.1.6 | Gene3D:1.10.3460.10 | GO:A0A078E6L5 | EnsemblPlants:CDX96677 | ProteinID:CDX96677 | ProteinID:CDX96677.1 |
InterPro:Chloro_AB-bd_pln | InterPro:Chloroa_b-bind | InterPro:Chlorophyll_a/b-bd_dom_sf | GO:GO:0005575 | GO:GO:0006091 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009765 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016020 | EnsemblPlantsGene:GSBRNA2T00102889001 |
InterPro:IPR023329 | PFAM:PF00504 | PANTHER:PTHR21649 | PANTHER:PTHR21649:SF5 | SUPFAM:SSF103511 | SignalP:SignalP-noTM |
UniParc:UPI0004EE22AB | SEG:seg | : | : | : | : |
Description
BnaA08g22200D
Coordinates
chrLK031895:-:550894..552118
Molecular Weight (calculated)
29371.1 Da
IEP (calculated)
5.337
GRAVY (calculated)
-0.123
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MALAIASALT STTLALSTSR VENGRGAFSS RVDGRTSQRL VVVRAGKEVS SVCEPLPPDR PMWFPGTSPP KWLDGSLPGD FGFDPLGLGS DPETLRWFAQ
101: AELIHSRWAM LAVTGILIPE CLERLGFIEN YSWYDAGSRE YFADSTTLFV VQLVLMGWAE GRRWADFIKP GSVDIEPQYP HKTNPKPDVG YPGGLWFDPM
201: MWGRGSPDPV MVMRTKEIKN GRLAMLAFVG FCFQANYSAS QDPIENLMAH LADPGHCNVF SAFTSQ
101: AELIHSRWAM LAVTGILIPE CLERLGFIEN YSWYDAGSRE YFADSTTLFV VQLVLMGWAE GRRWADFIKP GSVDIEPQYP HKTNPKPDVG YPGGLWFDPM
201: MWGRGSPDPV MVMRTKEIKN GRLAMLAFVG FCFQANYSAS QDPIENLMAH LADPGHCNVF SAFTSQ
001: MAFAIASALT STLTLSTSRV QNPTQRRPHV ASTSSTGGRL MRERLVVVRA GKEVSSVCEP LPPDRPLWFP GSSPPEWLDG SLPGDFGFDP LGLGSDPDTL
101: KWFAQAELIH SRWAMLAVTG IIIPECLERL GFIENFSWYD AGSREYFADS TTLFVAQMVL MGWAEGRRWA DLIKPGSVDI EPKYPHKVNP KPDVGYPGGL
201: WFDFMMWGRG SPEPVMVLRT KEIKNGRLAM LAFLGFCFQA TYTSQDPIEN LMAHLADPGH CNVFSAFTSH
101: KWFAQAELIH SRWAMLAVTG IIIPECLERL GFIENFSWYD AGSREYFADS TTLFVAQMVL MGWAEGRRWA DLIKPGSVDI EPKYPHKVNP KPDVGYPGGL
201: WFDFMMWGRG SPEPVMVLRT KEIKNGRLAM LAFLGFCFQA TYTSQDPIEN LMAHLADPGH CNVFSAFTSH
Arabidopsis Description
LHCA6Photosystem I chlorophyll a/b-binding protein 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LCQ4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.