Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66572 | Canola | cytosol, extracellular, plastid | 44.92 | 80.42 |
| CDY52238 | Canola | plastid | 72.27 | 79.06 |
| CDY14320 | Canola | plastid | 71.09 | 77.78 |
| CDY18320 | Canola | plastid | 70.7 | 77.35 |
| PGSC0003DMT400049550 | Potato | plastid | 76.56 | 74.81 |
| Solyc07g063600.2.1 | Tomato | nucleus | 76.56 | 74.81 |
| GSMUA_AchrUn_... | Banana | plastid | 66.8 | 74.03 |
| Solyc12g011450.1.1 | Tomato | plastid | 76.56 | 73.96 |
| PGSC0003DMT400022072 | Potato | plastid | 76.17 | 73.58 |
| VIT_19s0014g03660.t01 | Wine grape | plastid | 76.17 | 73.31 |
| KRH27171 | Soybean | mitochondrion, nucleus, plastid | 75.78 | 72.39 |
| KRH22164 | Soybean | nucleus, plastid | 75.39 | 72.28 |
| OQU90095 | Sorghum | plastid | 75.39 | 72.01 |
| Zm00001d021784_P001 | Maize | plastid | 75.39 | 71.75 |
| GSMUA_Achr1P08770_001 | Banana | plastid, unclear | 66.8 | 70.95 |
| TraesCS1B01G451100.1 | Wheat | plastid | 74.22 | 70.9 |
| TraesCS1D01G428200.1 | Wheat | plastid | 74.22 | 70.9 |
| TraesCS2A01G204800.1 | Wheat | plastid | 74.22 | 70.9 |
| Os07t0562700-01 | Rice | extracellular, plastid | 71.88 | 69.17 |
| HORVU2Hr1G040780.7 | Barley | plastid | 72.66 | 68.38 |
| CDY30369 | Canola | plastid | 38.67 | 65.13 |
| CDY26306 | Canola | plastid | 61.33 | 58.8 |
| CDX99866 | Canola | plastid | 61.33 | 58.8 |
| CDX84647 | Canola | plastid | 60.94 | 58.65 |
| CDX79562 | Canola | plastid | 60.94 | 58.65 |
| CDY35271 | Canola | plastid | 60.94 | 58.43 |
| CDY66768 | Canola | plastid | 60.94 | 58.43 |
| CDY43676 | Canola | plastid | 60.94 | 58.43 |
| CDX90218 | Canola | plastid | 60.94 | 58.43 |
| CDY03989 | Canola | plastid | 60.55 | 58.27 |
| CDX84316 | Canola | plastid | 60.55 | 58.27 |
| CDY17247 | Canola | plastid | 60.55 | 58.27 |
| CDY20039 | Canola | plastid | 60.16 | 58.11 |
| CDX93077 | Canola | plastid | 60.16 | 58.11 |
| CDY17248 | Canola | plastid | 60.16 | 57.89 |
| CDY49770 | Canola | plastid | 60.16 | 57.89 |
| CDY00149 | Canola | plastid | 60.16 | 57.89 |
| CDY13732 | Canola | plastid | 60.16 | 57.89 |
| CDY15050 | Canola | plastid | 59.77 | 57.74 |
| CDX98158 | Canola | plastid | 60.16 | 57.68 |
| CDY43198 | Canola | plastid | 60.16 | 57.68 |
| CDX83726 | Canola | plastid | 59.77 | 57.52 |
| CDY17250 | Canola | mitochondrion, plastid | 33.59 | 52.76 |
| CDX84315 | Canola | plastid | 60.16 | 46.81 |
| Zm00001d006592_P001 | Maize | plastid | 21.88 | 45.53 |
| CDX83967 | Canola | extracellular, vacuole | 3.52 | 39.13 |
| CDY05098 | Canola | plastid | 34.77 | 31.79 |
| CDX90755 | Canola | plastid | 34.77 | 31.79 |
| CDY60092 | Canola | plastid | 33.98 | 30.96 |
| CDX78277 | Canola | plastid | 27.73 | 29.46 |
| CDX73435 | Canola | plastid | 27.34 | 29.05 |
| CDY07517 | Canola | plastid | 27.34 | 29.05 |
| CDX67613 | Canola | plastid | 27.34 | 29.05 |
| CDY57375 | Canola | plastid | 29.69 | 28.04 |
| CDY12903 | Canola | plastid | 29.3 | 27.68 |
| CDY15020 | Canola | plastid | 29.3 | 27.68 |
| CDY45980 | Canola | plastid | 34.77 | 27.47 |
| CDY47581 | Canola | plastid | 28.91 | 27.11 |
| CDY03835 | Canola | plastid | 28.91 | 27.11 |
| CDY26347 | Canola | plastid | 26.95 | 27.06 |
| CDY43936 | Canola | plastid | 26.95 | 26.95 |
| CDX89120 | Canola | plastid | 26.95 | 26.95 |
| CDY20401 | Canola | plastid | 34.38 | 26.91 |
| CDX86864 | Canola | plastid | 21.88 | 26.79 |
| CDY51572 | Canola | plastid | 26.56 | 26.25 |
| CDX99044 | Canola | plastid | 25.78 | 26.19 |
| CDY47410 | Canola | plastid | 25.78 | 26.19 |
| CDY33376 | Canola | plastid | 25.78 | 25.58 |
| CDY35042 | Canola | plastid | 25.78 | 25.58 |
| CDX96833 | Canola | plastid | 25.39 | 25.1 |
| CDX81735 | Canola | plastid | 25.0 | 24.71 |
| CDY52865 | Canola | plastid | 25.0 | 24.71 |
| CDX83783 | Canola | plastid | 25.0 | 24.06 |
| CDX96677 | Canola | plastid | 25.0 | 24.06 |
| CDY43213 | Canola | mitochondrion, plastid | 24.22 | 24.03 |
| CDY44667 | Canola | plastid | 26.95 | 23.96 |
| CDY53084 | Canola | plastid | 26.95 | 23.88 |
| CDY04834 | Canola | plastid | 26.56 | 23.69 |
| CDY17055 | Canola | mitochondrion, plastid | 23.83 | 23.64 |
| CDX83966 | Canola | plastid | 20.31 | 22.81 |
| CDY20518 | Canola | plastid | 23.05 | 21.38 |
| CDX74808 | Canola | plastid | 23.05 | 21.38 |
| CDY61708 | Canola | plastid | 21.09 | 15.43 |
Protein Annotations
| MapMan:1.1.1.1.1 | Gene3D:1.10.3460.10 | GO:A0A078GVU7 | UniProt:A0A078GVU7 | EnsemblPlants:CDY28778 | ProteinID:CDY28778 |
| ProteinID:CDY28778.1 | InterPro:Chloro_AB-bd_pln | InterPro:Chloroa_b-bind | InterPro:Chlorophyll_a/b-bd_dom_sf | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009522 | GO:GO:0009523 | GO:GO:0009535 |
| GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009765 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016168 | GO:GO:0018298 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00041426001 | InterPro:IPR023329 |
| PFAM:PF00504 | PANTHER:PTHR21649 | PANTHER:PTHR21649:SF11 | SUPFAM:SSF103511 | UniParc:UPI0004EF3733 | : |
Description
BnaA02g09700DChlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A078GVU7]
Coordinates
chrLK032226:-:219568..220545
Molecular Weight (calculated)
28417.1 Da
IEP (calculated)
4.843
GRAVY (calculated)
0.150
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTFTNSSS VFCPTTFLGQ TKSSSFNPLR DVVSLGSHNT IWSGNYLWYG PDRVKYLGPF SVQTPSYPTG EFPGDYAFAK NIALEVMIYG RWAMLGAFGC
101: ITPEVLQKWV RVDFKEPVWF KAGSQIFSEG GLDYLGNPNL VHAQSILAVL GFQVILMGLV EGFRINRFDG VGEGNDLYPG GKYFDLLSLV DDQVTFVELK
201: VKEIKNGMLA MFSMFGFFVQ AIVTGKDPLE SLLDHLDNFV ANINAWAFTT KFVPEA
101: ITPEVLQKWV RVDFKEPVWF KAGSQIFSEG GLDYLGNPNL VHAQSILAVL GFQVILMGLV EGFRINRFDG VGEGNDLYPG GKYFDLLSLV DDQVTFVELK
201: VKEIKNGMLA MFSMFGFFVQ AIVTGKDPLE SLLDHLDNFV ANINAWAFTT KFVPEA
001: MASTFTSSSS VLTPTTFLGQ TKASSFNPLR DVVSLGSPKY TMGNDLWYGP DRVKYLGPFS VQTPSYLTGE FPGDYGWDTA GLSADPEAFA KNRALEVIHG
101: RWAMLGAFGC ITPEVLQKWV RVDFKEPVWF KAGSQIFSEG GLDYLGNPNL VHAQSILAVL GFQVILMGLV EGFRINGLDG VGEGNDLYPG GQYFDPLGLA
201: DDPVTFAELK VKEIKNGRLA MFSMFGFFVQ AIVTGKGPLE NLLDHLDNPV ANNAWAFATK FAPGA
101: RWAMLGAFGC ITPEVLQKWV RVDFKEPVWF KAGSQIFSEG GLDYLGNPNL VHAQSILAVL GFQVILMGLV EGFRINGLDG VGEGNDLYPG GQYFDPLGLA
201: DDPVTFAELK VKEIKNGRLA MFSMFGFFVQ AIVTGKGPLE NLLDHLDNPV ANNAWAFATK FAPGA
Arabidopsis Description
LHCB3Chlorophyll a-b binding protein 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S7M0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.