Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60092 | Canola | plastid | 96.17 | 71.53 |
| CDX90755 | Canola | plastid | 93.78 | 70.0 |
| CDY05098 | Canola | plastid | 93.3 | 69.64 |
| PGSC0003DMT400068129 | Potato | plastid | 80.86 | 59.3 |
| Solyc06g063370.2.1 | Tomato | plastid | 79.9 | 58.39 |
| GSMUA_Achr6P12670_001 | Banana | plasma membrane | 76.08 | 56.99 |
| TraesCS4D01G086400.1 | Wheat | plastid | 77.51 | 56.64 |
| TraesCS4B01G089500.1 | Wheat | mitochondrion, plastid | 77.51 | 56.64 |
| TraesCS4A01G226900.2 | Wheat | mitochondrion, plastid | 77.51 | 56.25 |
| Zm00001d007267_P002 | Maize | plastid | 76.08 | 56.18 |
| Zm00001d048998_P001 | Maize | plastid | 75.6 | 55.83 |
| Os11t0242800-01 | Rice | plastid | 75.12 | 55.48 |
| EES09551 | Sorghum | plastid | 74.64 | 55.32 |
| GSMUA_Achr3P02780_001 | Banana | plastid | 76.56 | 55.17 |
| GSMUA_Achr10P... | Banana | plastid | 72.25 | 52.43 |
| HORVU4Hr1G015260.2 | Barley | plastid | 65.07 | 47.22 |
| VIT_18s0089g01170.t01 | Wine grape | cytosol, extracellular, plastid | 81.82 | 42.54 |
| CDX84647 | Canola | plastid | 33.01 | 25.94 |
| CDY17248 | Canola | plastid | 33.01 | 25.94 |
| CDY17247 | Canola | plastid | 33.01 | 25.94 |
| CDX79562 | Canola | plastid | 33.01 | 25.94 |
| CDX84316 | Canola | plastid | 33.01 | 25.94 |
| CDY43198 | Canola | plastid | 33.01 | 25.84 |
| CDX98158 | Canola | plastid | 33.01 | 25.84 |
| CDY20039 | Canola | plastid | 32.54 | 25.66 |
| CDX93077 | Canola | plastid | 32.54 | 25.66 |
| CDY15050 | Canola | plastid | 32.54 | 25.66 |
| CDY52238 | Canola | plastid | 28.71 | 25.64 |
| CDY00149 | Canola | plastid | 32.54 | 25.56 |
| CDY03989 | Canola | plastid | 32.54 | 25.56 |
| CDX83726 | Canola | plastid | 32.54 | 25.56 |
| CDY13732 | Canola | plastid | 32.54 | 25.56 |
| CDY49770 | Canola | plastid | 32.54 | 25.56 |
| CDY43676 | Canola | plastid | 32.54 | 25.47 |
| CDY26306 | Canola | plastid | 32.54 | 25.47 |
| CDX90218 | Canola | plastid | 32.54 | 25.47 |
| CDX99866 | Canola | plastid | 32.54 | 25.47 |
| CDY35271 | Canola | plastid | 32.54 | 25.47 |
| CDY66768 | Canola | plastid | 32.54 | 25.47 |
| CDY14320 | Canola | plastid | 28.23 | 25.21 |
| CDY18320 | Canola | plastid | 28.23 | 25.21 |
| CDY28778 | Canola | plastid | 26.79 | 21.88 |
| CDY43936 | Canola | plastid | 26.79 | 21.88 |
| CDY51572 | Canola | plastid | 26.79 | 21.62 |
| CDX89120 | Canola | plastid | 26.32 | 21.48 |
| CDX84315 | Canola | plastid | 33.49 | 21.28 |
| KRH58809 | Soybean | mitochondrion | 32.06 | 21.14 |
| CDX99044 | Canola | plastid | 25.36 | 21.03 |
| CDY47410 | Canola | plastid | 25.36 | 21.03 |
| CDY66572 | Canola | cytosol, extracellular, plastid | 14.35 | 20.98 |
| CDY12903 | Canola | plastid | 26.79 | 20.66 |
| CDX83783 | Canola | plastid | 25.84 | 20.3 |
| CDY57375 | Canola | plastid | 26.32 | 20.3 |
| CDY15020 | Canola | plastid | 26.32 | 20.3 |
| CDY20401 | Canola | plastid | 31.58 | 20.18 |
| CDY47581 | Canola | plastid | 26.32 | 20.15 |
| CDY03835 | Canola | plastid | 26.32 | 20.15 |
| CDY45980 | Canola | plastid | 31.1 | 20.06 |
| CDY26347 | Canola | plastid | 24.4 | 20.0 |
| CDX96677 | Canola | plastid | 25.36 | 19.92 |
| CDX73435 | Canola | plastid | 22.49 | 19.5 |
| CDX67613 | Canola | plastid | 22.49 | 19.5 |
| CDX78277 | Canola | plastid | 22.49 | 19.5 |
| CDY07517 | Canola | plastid | 22.49 | 19.5 |
| CDY17055 | Canola | mitochondrion, plastid | 23.92 | 19.38 |
| CDY43213 | Canola | mitochondrion, plastid | 23.92 | 19.38 |
| CDY20518 | Canola | plastid | 25.36 | 19.2 |
| CDX74808 | Canola | plastid | 25.36 | 19.2 |
| CDY44667 | Canola | plastid | 25.84 | 18.75 |
| CDY04834 | Canola | plastid | 25.36 | 18.47 |
| CDY53084 | Canola | plastid | 24.88 | 17.99 |
| CDY17250 | Canola | mitochondrion, plastid | 13.4 | 17.18 |
| CDY30369 | Canola | plastid | 12.44 | 17.11 |
| CDY35042 | Canola | plastid | 21.05 | 17.05 |
| CDX96833 | Canola | plastid | 21.05 | 16.99 |
| CDX81735 | Canola | plastid | 21.05 | 16.99 |
| CDY52865 | Canola | plastid | 21.05 | 16.99 |
| CDY33376 | Canola | plastid | 20.57 | 16.67 |
| CDX83966 | Canola | plastid | 16.27 | 14.91 |
| CDY61708 | Canola | plastid | 17.7 | 10.57 |
| CDX83967 | Canola | extracellular, vacuole | 0.0 | 0.0 |
Protein Annotations
| MapMan:1.1.1.1.3 | Gene3D:1.10.3460.10 | GO:A0A078DER5 | EnsemblPlants:CDX86864 | ProteinID:CDX86864 | ProteinID:CDX86864.1 |
| InterPro:Chloro_AB-bd_pln | InterPro:Chloroa_b-bind | InterPro:Chlorophyll_a/b-bd_dom_sf | GO:GO:0005575 | GO:GO:0006091 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009765 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016020 | EnsemblPlantsGene:GSBRNA2T00145627001 |
| InterPro:IPR023329 | PFAM:PF00504 | PANTHER:PTHR21649 | PANTHER:PTHR21649:SF53 | SUPFAM:SSF103511 | UniParc:UPI0004EDD2A5 |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g22540D
Coordinates
chrLK031847:-:1366832..1368110
Molecular Weight (calculated)
22493.1 Da
IEP (calculated)
7.403
GRAVY (calculated)
-0.013
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MASLGVSEML GTPLNFRAVS RPSAPLASIP ATFKTVALFS KKKPAPPPKA KTVSAANDEL AKWYGPDRRI FLPDGLLDRS EIPEYLNGEV AGDYGYDPFG
101: LGKKPENFAK YQAFELIHAR WAMLGAAGCI IPEALNKYGA NCGPEAVWFK TGALLLDGNT LSYFGKNIPI NLVLAVVAEV VLLGGAEYYR ITNGLDFEDK
201: LHPGGPFAT
101: LGKKPENFAK YQAFELIHAR WAMLGAAGCI IPEALNKYGA NCGPEAVWFK TGALLLDGNT LSYFGKNIPI NLVLAVVAEV VLLGGAEYYR ITNGLDFEDK
201: LHPGGPFAT
001: MASLGVSEML GTPLNFRAVS RSSAPLASSP STFKTVALFS KKKPAPAKSK AVSETSDELA KWYGPDRRIF LPDGLLDRSE IPEYLNGEVA GDYGYDPFGL
101: GKKPENFAKY QAFELIHARW AMLGAAGFII PEALNKYGAN CGPEAVWFKT GALLLDGNTL NYFGKNIPIN LVLAVVAEVV LLGGAEYYRI TNGLDFEDKL
201: HPGGPFDPLG LAKDPEQGAL LKVKEIKNGR LAMFAMLGFF IQAYVTGEGP VENLAKHLSD PFGNNLLTVI AGTAERAPTL
101: GKKPENFAKY QAFELIHARW AMLGAAGFII PEALNKYGAN CGPEAVWFKT GALLLDGNTL NYFGKNIPIN LVLAVVAEVV LLGGAEYYRI TNGLDFEDKL
201: HPGGPFDPLG LAKDPEQGAL LKVKEIKNGR LAMFAMLGFF IQAYVTGEGP VENLAKHLSD PFGNNLLTVI AGTAERAPTL
Arabidopsis Description
LHCB5Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178UW55]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.