Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G086400.1 | Wheat | plastid | 100.0 | 100.0 |
| TraesCS4A01G226900.2 | Wheat | mitochondrion, plastid | 100.0 | 99.31 |
| Os11t0242800-01 | Rice | plastid | 89.51 | 90.46 |
| HORVU4Hr1G015260.2 | Barley | plastid | 89.86 | 89.24 |
| Zm00001d048998_P001 | Maize | plastid | 87.76 | 88.69 |
| EES09551 | Sorghum | plastid | 87.41 | 88.65 |
| Zm00001d007267_P002 | Maize | plastid | 87.06 | 87.99 |
| AT4G10340.1 | Thale cress | plastid | 79.02 | 80.71 |
| CDX90755 | Canola | plastid | 79.02 | 80.71 |
| CDY60092 | Canola | plastid | 78.67 | 80.07 |
| Bra000708.1-P | Field mustard | plastid | 78.32 | 80.0 |
| Bra037913.1-P | Field mustard | plastid | 78.32 | 79.72 |
| CDY05098 | Canola | plastid | 77.97 | 79.64 |
| GSMUA_Achr6P12670_001 | Banana | plasma membrane | 76.92 | 78.85 |
| Solyc06g063370.2.1 | Tomato | plastid | 77.62 | 77.62 |
| PGSC0003DMT400068129 | Potato | plastid | 77.27 | 77.54 |
| CDX86864 | Canola | plastid | 56.64 | 77.51 |
| GSMUA_Achr3P02780_001 | Banana | plastid | 78.32 | 77.24 |
| GSMUA_Achr10P... | Banana | plastid | 73.78 | 73.26 |
| VIT_18s0089g01170.t01 | Wine grape | cytosol, extracellular, plastid | 79.37 | 56.47 |
| TraesCS6B01G122700.1 | Wheat | mitochondrion, plastid | 37.06 | 50.0 |
| TraesCS6B01G122500.1 | Wheat | cytosol, extracellular, plastid | 26.57 | 47.5 |
| TraesCS5B01G353200.1 | Wheat | plastid | 43.36 | 46.79 |
| TraesCS5B01G462800.1 | Wheat | plastid | 43.01 | 46.24 |
| TraesCS5B01G463100.1 | Wheat | plastid | 42.66 | 45.86 |
| TraesCS5B01G463000.1 | Wheat | plastid | 42.66 | 45.86 |
| TraesCS1B01G432700.1 | Wheat | plastid | 42.31 | 45.49 |
| TraesCS7B01G103300.1 | Wheat | plastid | 42.31 | 45.49 |
| TraesCS5B01G322900.1 | Wheat | plastid | 41.61 | 45.25 |
| TraesCS1B01G433300.1 | Wheat | plastid | 41.96 | 45.11 |
| TraesCS7B01G103400.1 | Wheat | plastid | 41.96 | 45.11 |
| TraesCS1B01G388200.1 | Wheat | plastid | 41.61 | 44.91 |
| TraesCS1B01G388500.1 | Wheat | plastid | 41.26 | 44.53 |
| TraesCS6B01G122800.1 | Wheat | plastid | 40.91 | 43.98 |
| TraesCS6B01G122600.1 | Wheat | plastid | 40.91 | 43.98 |
| TraesCS1B01G388300.1 | Wheat | plastid | 40.56 | 43.77 |
| TraesCS1B01G451100.1 | Wheat | plastid | 40.21 | 42.91 |
| TraesCS1B01G317500.1 | Wheat | plastid | 22.73 | 42.48 |
| KRH58809 | Soybean | mitochondrion | 44.06 | 39.75 |
| TraesCS5B01G462900.1 | Wheat | plastid | 28.32 | 39.71 |
| TraesCS5B01G210800.2 | Wheat | cytosol, plastid | 28.32 | 34.03 |
| TraesCS2B01G220100.1 | Wheat | golgi, plastid | 30.07 | 33.73 |
| TraesCS6B01G350500.1 | Wheat | plastid | 30.07 | 33.46 |
| TraesCS5B01G175000.1 | Wheat | plastid | 36.01 | 33.33 |
| TraesCS6B01G191500.1 | Wheat | plastid | 30.42 | 32.34 |
| TraesCS5B01G227900.1 | Wheat | plastid | 27.27 | 31.84 |
| TraesCS2B01G233400.1 | Wheat | plastid | 31.82 | 31.82 |
| TraesCS7B01G192500.1 | Wheat | plastid | 26.57 | 31.02 |
| TraesCS6B01G312900.1 | Wheat | plastid | 13.64 | 26.9 |
| TraesCS2B01G340300.1 | Wheat | plastid | 23.08 | 25.88 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G089500.1 | EnsemblPlantsGene:TraesCS4B01G089500 | Gene3D:1.10.3460.10 | GO:GO:0005575 | GO:GO:0006091 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009765 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016020 | InterPro:Chloro_AB-bd_pln |
| InterPro:Chloroa_b-bind | InterPro:Chlorophyll_a/b-bd_dom_sf | InterPro:IPR023329 | PANTHER:PTHR21649 | PANTHER:PTHR21649:SF53 | PFAM:PF00504 |
| SEG:seg | SUPFAM:SSF103511 | MapMan:1.1.1.1.3 | : | : | : |
Description
No Description!
Coordinates
chr4B:+:90727625..90729025
Molecular Weight (calculated)
30787.1 Da
IEP (calculated)
5.791
GRAVY (calculated)
-0.003
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALAPTKML GTRLNFAGSS RYATAAPTAG AQKIVSLFDR FKKKPAPKPK PAPVATSSVG IDDELAKWYG PDRRIYLPNG LLDRSEVPEY LNGEVPGDYG
101: YDPFGLGKKP EDFAKYQAFE LIHARWAMLG AAGFIIPEAL NKFGANCGPE AVWFKTGALL LDGNTLNYFG NSIPINLILA VVAEVVLVGG AEYYRITNGL
201: EFDDKLHPGG PFDPLGLATD PDQAALLKVK EIKNGRLAMF SMLGFFIQAY VTGEGPFENL CAHLSDPFGN NLLTVISGAA ERVPSL
101: YDPFGLGKKP EDFAKYQAFE LIHARWAMLG AAGFIIPEAL NKFGANCGPE AVWFKTGALL LDGNTLNYFG NSIPINLILA VVAEVVLVGG AEYYRITNGL
201: EFDDKLHPGG PFDPLGLATD PDQAALLKVK EIKNGRLAMF SMLGFFIQAY VTGEGPFENL CAHLSDPFGN NLLTVISGAA ERVPSL
001: MASLGVSEML GTPLNFRAVS RSSAPLASSP STFKTVALFS KKKPAPAKSK AVSETSDELA KWYGPDRRIF LPDGLLDRSE IPEYLNGEVA GDYGYDPFGL
101: GKKPENFAKY QAFELIHARW AMLGAAGFII PEALNKYGAN CGPEAVWFKT GALLLDGNTL NYFGKNIPIN LVLAVVAEVV LLGGAEYYRI TNGLDFEDKL
201: HPGGPFDPLG LAKDPEQGAL LKVKEIKNGR LAMFAMLGFF IQAYVTGEGP VENLAKHLSD PFGNNLLTVI AGTAERAPTL
101: GKKPENFAKY QAFELIHARW AMLGAAGFII PEALNKYGAN CGPEAVWFKT GALLLDGNTL NYFGKNIPIN LVLAVVAEVV LLGGAEYYRI TNGLDFEDKL
201: HPGGPFDPLG LAKDPEQGAL LKVKEIKNGR LAMFAMLGFF IQAYVTGEGP VENLAKHLSD PFGNNLLTVI AGTAERAPTL
Arabidopsis Description
LHCB5Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178UW55]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.