Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G086400.1 | Wheat | plastid | 99.31 | 100.0 |
| TraesCS4B01G089500.1 | Wheat | mitochondrion, plastid | 99.31 | 100.0 |
| Os11t0242800-01 | Rice | plastid | 88.89 | 90.46 |
| HORVU4Hr1G015260.2 | Barley | plastid | 89.24 | 89.24 |
| Zm00001d048998_P001 | Maize | plastid | 87.15 | 88.69 |
| EES09551 | Sorghum | plastid | 86.81 | 88.65 |
| Zm00001d007267_P002 | Maize | plastid | 86.46 | 87.99 |
| AT4G10340.1 | Thale cress | plastid | 78.47 | 80.71 |
| CDX90755 | Canola | plastid | 78.47 | 80.71 |
| CDY60092 | Canola | plastid | 78.12 | 80.07 |
| Bra000708.1-P | Field mustard | plastid | 77.78 | 80.0 |
| Bra037913.1-P | Field mustard | plastid | 77.78 | 79.72 |
| CDY05098 | Canola | plastid | 77.43 | 79.64 |
| GSMUA_Achr6P12670_001 | Banana | plasma membrane | 76.39 | 78.85 |
| Solyc06g063370.2.1 | Tomato | plastid | 77.08 | 77.62 |
| PGSC0003DMT400068129 | Potato | plastid | 76.74 | 77.54 |
| CDX86864 | Canola | plastid | 56.25 | 77.51 |
| GSMUA_Achr3P02780_001 | Banana | plastid | 77.78 | 77.24 |
| GSMUA_Achr10P... | Banana | plastid | 73.26 | 73.26 |
| VIT_18s0089g01170.t01 | Wine grape | cytosol, extracellular, plastid | 78.82 | 56.47 |
| TraesCS5A01G454400.1 | Wheat | mitochondrion, plastid | 31.6 | 54.49 |
| TraesCS5A01G350600.1 | Wheat | plastid | 43.06 | 46.79 |
| TraesCS6A01G094600.1 | Wheat | plastid | 41.32 | 46.48 |
| TraesCS7A01G276400.1 | Wheat | plastid | 41.67 | 46.15 |
| TraesCS6A01G094100.1 | Wheat | plastid | 42.36 | 45.86 |
| TraesCS5A01G454200.1 | Wheat | plastid | 42.36 | 45.86 |
| TraesCS1A01G306600.1 | Wheat | plastid | 42.01 | 45.66 |
| TraesCS1A01G403300.1 | Wheat | plastid | 42.01 | 45.49 |
| TraesCS5A01G454300.1 | Wheat | plastid | 42.01 | 45.49 |
| TraesCS5A01G322500.1 | Wheat | plastid | 41.32 | 45.25 |
| TraesCS7A01G238400.1 | Wheat | plastid | 41.32 | 44.74 |
| TraesCS1A01G403800.1 | Wheat | plastid | 40.97 | 44.36 |
| TraesCS6A01G093700.1 | Wheat | plastid | 40.97 | 44.36 |
| TraesCS6A01G094300.1 | Wheat | plastid | 40.62 | 43.98 |
| TraesCS7A01G237100.1 | Wheat | plastid | 40.28 | 43.61 |
| TraesCS2A01G204800.1 | Wheat | plastid | 39.93 | 42.91 |
| KRH58809 | Soybean | mitochondrion | 44.1 | 40.06 |
| TraesCS6A01G094500.1 | Wheat | plastid | 41.67 | 39.34 |
| TraesCS6A01G094400.1 | Wheat | plastid | 41.67 | 36.04 |
| TraesCS6A01G094200.1 | Wheat | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 40.62 | 35.78 |
| TraesCS6A01G319700.1 | Wheat | plastid | 30.21 | 34.25 |
| TraesCS2A01G187200.1 | Wheat | plastid | 29.86 | 33.46 |
| TraesCS5A01G177700.1 | Wheat | plastid | 35.42 | 32.9 |
| TraesCS6A01G159800.1 | Wheat | plastid | 30.21 | 32.34 |
| TraesCS5A01G229300.1 | Wheat | mitochondrion, plastid | 27.08 | 31.84 |
| TraesCS2A01G206200.1 | Wheat | plastid | 31.6 | 31.82 |
| TraesCS7A01G227100.1 | Wheat | plastid | 26.39 | 30.77 |
| TraesCS5A01G213000.1 | Wheat | plastid | 27.08 | 28.57 |
| TraesCS2A01G342600.1 | Wheat | plastid | 22.92 | 25.88 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G226900.2 | EnsemblPlantsGene:TraesCS4A01G226900 | Gene3D:1.10.3460.10 | GO:GO:0005575 | GO:GO:0006091 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009765 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016020 | InterPro:Chloro_AB-bd_pln |
| InterPro:Chloroa_b-bind | InterPro:Chlorophyll_a/b-bd_dom_sf | InterPro:IPR023329 | PANTHER:PTHR21649 | PANTHER:PTHR21649:SF53 | PFAM:PF00504 |
| SEG:seg | SUPFAM:SSF103511 | MapMan:1.1.1.1.3 | : | : | : |
Description
No Description!
Coordinates
chr4A:-:535242506..535243985
Molecular Weight (calculated)
30977.3 Da
IEP (calculated)
5.790
GRAVY (calculated)
0.002
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALAPTKML GTRLNFAGSS RYATAAPTAG AQKIVSLFDR FKKKPAPKPK PAPVATSSVG IDDELAKWYG PDRRIYLPNG LLDRSEVPEY LNGEVPGDCS
101: YGYDPFGLGK KPEDFAKYQA FELIHARWAM LGAAGFIIPE ALNKFGANCG PEAVWFKTGA LLLDGNTLNY FGNSIPINLI LAVVAEVVLV GGAEYYRITN
201: GLEFDDKLHP GGPFDPLGLA TDPDQAALLK VKEIKNGRLA MFSMLGFFIQ AYVTGEGPFE NLCAHLSDPF GNNLLTVISG AAERVPSL
101: YGYDPFGLGK KPEDFAKYQA FELIHARWAM LGAAGFIIPE ALNKFGANCG PEAVWFKTGA LLLDGNTLNY FGNSIPINLI LAVVAEVVLV GGAEYYRITN
201: GLEFDDKLHP GGPFDPLGLA TDPDQAALLK VKEIKNGRLA MFSMLGFFIQ AYVTGEGPFE NLCAHLSDPF GNNLLTVISG AAERVPSL
001: MASLGVSEML GTPLNFRAVS RSSAPLASSP STFKTVALFS KKKPAPAKSK AVSETSDELA KWYGPDRRIF LPDGLLDRSE IPEYLNGEVA GDYGYDPFGL
101: GKKPENFAKY QAFELIHARW AMLGAAGFII PEALNKYGAN CGPEAVWFKT GALLLDGNTL NYFGKNIPIN LVLAVVAEVV LLGGAEYYRI TNGLDFEDKL
201: HPGGPFDPLG LAKDPEQGAL LKVKEIKNGR LAMFAMLGFF IQAYVTGEGP VENLAKHLSD PFGNNLLTVI AGTAERAPTL
101: GKKPENFAKY QAFELIHARW AMLGAAGFII PEALNKYGAN CGPEAVWFKT GALLLDGNTL NYFGKNIPIN LVLAVVAEVV LLGGAEYYRI TNGLDFEDKL
201: HPGGPFDPLG LAKDPEQGAL LKVKEIKNGR LAMFAMLGFF IQAYVTGEGP VENLAKHLSD PFGNNLLTVI AGTAERAPTL
Arabidopsis Description
LHCB5Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178UW55]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.