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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90755 Canola plastid 98.93 98.93
Bra000708.1-P Field mustard plastid 97.86 97.86
CDY60092 Canola plastid 96.43 96.09
AT4G10340.1 Thale cress plastid 95.71 95.71
CDX86864 Canola plastid 69.64 93.3
PGSC0003DMT400068129 Potato plastid 82.86 81.4
Solyc06g063370.2.1 Tomato plastid 82.86 81.12
GSMUA_Achr6P12670_001 Banana plasma membrane 80.71 81.0
Os11t0242800-01 Rice plastid 78.93 78.09
TraesCS4D01G086400.1 Wheat plastid 79.64 77.97
TraesCS4B01G089500.1 Wheat mitochondrion, plastid 79.64 77.97
GSMUA_Achr3P02780_001 Banana plastid 80.71 77.93
TraesCS4A01G226900.2 Wheat mitochondrion, plastid 79.64 77.43
Zm00001d048998_P001 Maize plastid 77.5 76.68
EES09551 Sorghum plastid 77.14 76.6
Zm00001d007267_P002 Maize plastid 77.14 76.33
GSMUA_Achr10P... Banana plastid 76.79 74.65
HORVU4Hr1G015260.2 Barley plastid 70.36 68.4
VIT_18s0089g01170.t01 Wine grape cytosol, extracellular, plastid 86.43 60.2
CDY66572 Canola cytosol, extracellular, plastid 25.36 49.65
CDY30369 Canola plastid 25.0 46.05
CDY52238 Canola plastid 36.07 43.16
CDY17250 Canola mitochondrion, plastid 25.0 42.94
CDY18320 Canola plastid 35.71 42.73
CDY14320 Canola plastid 35.71 42.73
KRH58809 Soybean mitochondrion 48.21 42.59
CDX84316 Canola plastid 40.36 42.48
CDY17247 Canola plastid 40.36 42.48
CDX79562 Canola plastid 40.36 42.48
CDX84647 Canola plastid 40.36 42.48
CDY43676 Canola plastid 40.36 42.32
CDY66768 Canola plastid 40.36 42.32
CDY15050 Canola plastid 40.0 42.26
CDX93077 Canola plastid 40.0 42.26
CDY17248 Canola plastid 40.0 42.11
CDY43198 Canola plastid 40.0 41.95
CDY35271 Canola plastid 40.0 41.95
CDX99866 Canola plastid 40.0 41.95
CDX90218 Canola plastid 40.0 41.95
CDX98158 Canola plastid 40.0 41.95
CDY26306 Canola plastid 40.0 41.95
CDX83726 Canola plastid 39.64 41.73
CDY20039 Canola plastid 39.29 41.51
CDY00149 Canola plastid 39.29 41.35
CDY49770 Canola plastid 39.29 41.35
CDY03989 Canola plastid 39.29 41.35
CDY13732 Canola plastid 38.93 40.98
CDX83967 Canola extracellular, vacuole 3.21 39.13
CDY28778 Canola plastid 31.79 34.77
CDX84315 Canola plastid 40.71 34.65
CDX73435 Canola plastid 29.29 34.02
CDX67613 Canola plastid 29.29 34.02
CDX78277 Canola plastid 29.29 34.02
CDY07517 Canola plastid 29.29 34.02
CDY43936 Canola plastid 31.07 33.98
CDY12903 Canola plastid 32.86 33.95
CDY47410 Canola plastid 30.36 33.73
CDX99044 Canola plastid 30.36 33.73
CDY26347 Canola plastid 30.71 33.73
CDX89120 Canola plastid 30.71 33.59
CDY51572 Canola plastid 31.07 33.59
CDY57375 Canola plastid 32.5 33.58
CDY15020 Canola plastid 32.5 33.58
CDY47581 Canola plastid 32.5 33.33
CDY43213 Canola mitochondrion, plastid 30.71 33.33
CDY03835 Canola plastid 32.5 33.33
CDY17055 Canola mitochondrion, plastid 30.36 32.95
CDY45980 Canola plastid 37.86 32.72
CDY20401 Canola plastid 37.86 32.42
CDX83783 Canola plastid 28.57 30.08
CDY44667 Canola plastid 30.71 29.86
CDX96677 Canola plastid 28.21 29.7
CDY04834 Canola plastid 30.36 29.62
CDY53084 Canola plastid 30.36 29.41
CDX74808 Canola plastid 28.93 29.35
CDY20518 Canola plastid 28.57 28.99
CDY35042 Canola plastid 24.64 26.74
CDX81735 Canola plastid 24.64 26.64
CDY52865 Canola plastid 24.64 26.64
CDX96833 Canola plastid 24.64 26.64
CDY33376 Canola plastid 24.29 26.36
CDX83966 Canola plastid 21.43 26.32
CDY61708 Canola plastid 22.5 18.0
Protein Annotations
MapMan:1.1.1.1.3Gene3D:1.10.3460.10GO:A0A078EZK3EnsemblPlants:CDY05098ProteinID:CDY05098ProteinID:CDY05098.1
InterPro:Chloro_AB-bd_plnInterPro:Chloroa_b-bindInterPro:Chlorophyll_a/b-bd_dom_sfGO:GO:0005575GO:GO:0006091GO:GO:0008150
GO:GO:0008152GO:GO:0009765GO:GO:0009987GO:GO:0015979GO:GO:0016020EnsemblPlantsGene:GSBRNA2T00119862001
InterPro:IPR023329PFAM:PF00504PANTHER:PTHR21649PANTHER:PTHR21649:SF53SUPFAM:SSF103511UniParc:UPI0004EE00A3
SEG:seg:::::
Description
BnaC03g28960D
Coordinates
chrLK031959:+:598700..600387
Molecular Weight (calculated)
30116.4 Da
IEP (calculated)
7.581
GRAVY (calculated)
-0.031
Length
280 amino acids
Sequence
(BLAST)
001: MASMGVSEML GKPLNFKAVS RSSAPSASSP ATFKTVALFS KKKPAPAKAK TVSVANDELA KWYGPDRRVF LPDGLLDRSE IPEYLNGEVA GDYGYDPFGL
101: GKKPENFAKY QAFELIHARW AMLGAAGFII PEALNKYGAN CGPEAVWFKT GALLLDGNTL NYFGKNIPIN LVLAVVAEVV LLGGAEYYRI TNGLDFEDKL
201: HPGGPFDPLG LAKDPEQGAL LKVKEIKNGR LAMFAMLGFF IQAYVTGEGP VENLSKHLSD PFGNNLLTVI AGTAERAPTL
Best Arabidopsis Sequence Match ( AT4G10340.1 )
(BLAST)
001: MASLGVSEML GTPLNFRAVS RSSAPLASSP STFKTVALFS KKKPAPAKSK AVSETSDELA KWYGPDRRIF LPDGLLDRSE IPEYLNGEVA GDYGYDPFGL
101: GKKPENFAKY QAFELIHARW AMLGAAGFII PEALNKYGAN CGPEAVWFKT GALLLDGNTL NYFGKNIPIN LVLAVVAEVV LLGGAEYYRI TNGLDFEDKL
201: HPGGPFDPLG LAKDPEQGAL LKVKEIKNGR LAMFAMLGFF IQAYVTGEGP VENLAKHLSD PFGNNLLTVI AGTAERAPTL
Arabidopsis Description
LHCB5Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A178UW55]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.