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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G322500.1 Wheat plastid 100.0 100.0
TraesCS5D01G329200.1 Wheat plastid 100.0 100.0
Os03t0592500-01 Rice extracellular 94.68 94.68
Zm00001d033136_P001 Maize plastid 90.87 91.92
Zm00001d033132_P001 Maize plastid 90.87 91.92
EER93861 Sorghum plastid 91.25 91.6
VIT_12s0057g00630.t01 Wine grape plastid 87.07 86.42
PGSC0003DMT400015740 Potato plastid 85.55 84.91
KRH74003 Soybean nucleus, plastid 85.17 84.53
KRH14122 Soybean nucleus, plastid 85.17 84.53
GSMUA_Achr4P33040_001 Banana plastid, unclear 84.79 84.47
CDY15050 Canola plastid 84.79 84.15
Solyc07g047850.2.1 Tomato plastid 84.79 84.15
Bra013183.1-P Field mustard plastid 84.41 83.77
CDX93077 Canola plastid 84.41 83.77
AT2G05070.1 Thale cress plastid 84.41 83.77
CDY20039 Canola plastid 84.03 83.4
PGSC0003DMT400010985 Potato plastid 84.03 83.4
Bra039070.1-P Field mustard plastid 84.03 83.4
CDY13732 Canola plastid 84.03 83.08
CDY49770 Canola plastid 84.03 83.08
CDY00149 Canola plastid 84.03 83.08
CDX83726 Canola plastid 84.03 83.08
Bra025297.1-P Field mustard plastid 84.03 83.08
Solyc12g006140.1.1 Tomato plastid 83.65 83.02
CDY03989 Canola plastid 83.65 82.71
Bra033022.1-P Field mustard plastid 78.71 80.23
TraesCS6B01G122700.1 Wheat mitochondrion, plastid 64.64 80.19
TraesCS6B01G122500.1 Wheat cytosol, extracellular, plastid 48.67 80.0
HORVU5Hr1G082420.1 Barley plastid 99.24 76.09
Zm00001d013766_P001 Maize plastid 41.44 75.69
TraesCS1B01G432700.1 Wheat plastid 76.05 75.19
TraesCS5B01G353200.1 Wheat plastid 75.29 74.72
TraesCS1B01G317500.1 Wheat plastid 43.35 74.51
AT3G27690.2 Thale cress golgi, plastid 84.03 74.16
TraesCS1B01G433300.1 Wheat plastid 74.9 74.06
TraesCS6B01G122800.1 Wheat plastid 74.9 74.06
TraesCS5B01G463100.1 Wheat plastid 74.9 74.06
TraesCS1B01G388200.1 Wheat plastid 74.52 73.96
TraesCS5B01G462800.1 Wheat plastid 74.52 73.68
TraesCS5B01G463000.1 Wheat plastid 74.52 73.68
TraesCS7B01G103300.1 Wheat plastid 74.52 73.68
TraesCS7B01G103400.1 Wheat plastid 73.76 72.93
TraesCS1B01G388300.1 Wheat plastid 73.38 72.83
TraesCS1B01G388500.1 Wheat plastid 73.38 72.83
TraesCS6B01G122600.1 Wheat plastid 71.48 70.68
TraesCS5B01G462900.1 Wheat plastid 54.75 70.59
TraesCS1B01G451100.1 Wheat plastid 70.72 69.4
AT2G05100.2 Thale cress plastid 78.33 64.98
TraesCS4B01G089500.1 Wheat mitochondrion, plastid 45.25 41.61
TraesCS5B01G175000.1 Wheat plastid 41.83 35.6
TraesCS7B01G192500.1 Wheat plastid 31.56 33.88
TraesCS2B01G220100.1 Wheat golgi, plastid 31.94 32.94
TraesCS6B01G350500.1 Wheat plastid 31.94 32.68
TraesCS5B01G210800.2 Wheat cytosol, plastid 28.9 31.93
TraesCS5B01G227900.1 Wheat plastid 29.28 31.43
TraesCS6B01G191500.1 Wheat plastid 30.42 29.74
TraesCS2B01G233400.1 Wheat plastid 31.18 28.67
TraesCS6B01G312900.1 Wheat plastid 15.21 27.59
TraesCS2B01G340300.1 Wheat plastid 25.48 26.27
Protein Annotations
EnsemblPlants:TraesCS5B01G322900.1EnsemblPlantsGene:TraesCS5B01G322900Gene3D:1.10.3460.10GO:GO:0005575GO:GO:0006091GO:GO:0008150
GO:GO:0008152GO:GO:0009765GO:GO:0009987GO:GO:0015979GO:GO:0016020InterPro:Chloro_AB-bd_pln
InterPro:Chloroa_b-bindInterPro:Chlorophyll_a/b-bd_dom_sfInterPro:IPR023329PANTHER:PTHR21649PANTHER:PTHR21649:SF33PFAM:PF00504
SEG:segSUPFAM:SSF103511MapMan:1.1.1.1.1:::
Description
No Description!
Coordinates
chr5B:+:507704959..507705851
Molecular Weight (calculated)
28340.7 Da
IEP (calculated)
4.914
GRAVY (calculated)
-0.029
Length
263 amino acids
Sequence
(BLAST)
001: MAASALHQTT SFLGTAPRRD DLVRSVGDFG GRITMRRTVK SAPQSIWYGP DRPKYLGPFS EQTPSYLTGE FPGDYGWDTA GLSADPETFA KNRELEVIHS
101: RWAMLGALGC VFPEILSKNG IKFGEAVWFK AGAQIFSEGG LDYLGNPNLV HAQSILAIWA VQVVLMGFIE GYRVGGGPLG EGLDIIYPGG AFDPLGLADD
201: PDTAAELKVK ELKNGRLAMF SMFGFFVQAI VTGKGPVENL FDHVADPVNN NAWAFATNFA PGS
Best Arabidopsis Sequence Match ( AT3G27690.2 )
(BLAST)
001: MNTLLYKRRL QFNNISFSLT SFLFLCSCLE EAMATSAIQH SSFAGQTTLK PSNDLLRKIG ASNGGGRIIM RRTVKSTPQS IWYGPDRPKY LGPFSENTPS
101: YLTGEYPGDY GWDTAGLSAD PETFAKNREL EVIHSRWAML GALGCTFPEI LSKNGVKFGE AVWFKAGSQI FSEGGLDYLG NPNLIHAQSI LAIWACQVVL
201: MGFIEGYRIG GGPLGEGLDP LYPGGAFDPL NLAEDPEAFS ELKVKELKNG RLAMFSMFGF FVQAIVTGKG PIENLFDHIA DPVANNAWAY ATNFVPGK
Arabidopsis Description
LHCB2.4Chlorophyll a-b binding protein, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMB4]
SUBAcon: [golgi,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.