Factsheet for HORVU2Hr1G046230.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G018030.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G10530.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G037120.1	Barley	cytosol, nucleus, plastid	40.4	54.05
HORVU6Hr1G016260.1	Barley	cytosol	39.39	52.7
HORVU7Hr1G050690.1	Barley	cytosol, extracellular, nucleus	24.24	52.17
HORVU7Hr1G043570.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	38.38	51.35
HORVU5Hr1G075250.1	Barley	cytosol	23.23	50.0
HORVU4Hr1G011790.3	Barley	cytosol	95.96	17.89
HORVU2Hr1G124260.1	Barley	plastid	88.89	15.22
TraesCS1B01G399700.1	Wheat	nucleus	76.77	14.23
TraesCS1D01G385600.1	Wheat	nucleus	75.76	14.23
Zm00001d036359_P001	Maize	nucleus	71.72	13.95
EER88999	Sorghum	nucleus	70.71	13.73
Os01t0183100-01	Rice	nucleus	73.74	13.67
EES05140	Sorghum	nucleus	70.71	13.33
GSMUA_Achr6P16550_001	Banana	cytosol	68.69	12.78
PGSC0003DMT400078468	Potato	nucleus	59.6	11.68
KRG92087	Soybean	nucleus	62.63	11.59
KRH34701	Soybean	nucleus	62.63	11.59
Bra029849.1-P	Field mustard	nucleus	57.58	11.33
Solyc05g008190.2.1	Tomato	nucleus	59.6	11.2
VIT_13s0074g00030.t01	Wine grape	nucleus	60.61	11.19
AT3G10530.1	Thale cress	nucleus	58.59	10.82
CDY08595	Canola	mitochondrion, nucleus	57.58	10.42
CDY41358	Canola	nucleus	55.56	10.26
CDY71163	Canola	nucleus	55.56	10.26
Bra034124.1-P	Field mustard	nucleus	55.56	10.26
CDY00951	Canola	plastid	56.57	10.16
HORVU4Hr1G011830.1	Barley	cytosol, mitochondrion, nucleus	1.01	1.06

Protein Annotations

EnsemblPlants:HORVU2Hr1G046230.4

EnsemblPlantsGene:HORVU2Hr1G046230

PANTHER:PTHR14085

UniParc:UPI000B487086

UniProt:A0A287HWC0

MapMan:35.2

Description

No Description!

Coordinates

chrchr2H:+:245518295..245519772

Molecular Weight (calculated)

11136.6 Da

IEP (calculated)

5.144

GRAVY (calculated)

-0.275

Length

99 amino acids

Sequence
(BLAST)

1: EKLIGISAKA ATQAEKVFLP IEGGYLEPEG LEKTYRYRQQ DLGSSVDILS SRKPFDMILP ELGPYTLEYT SNGRYMIVGG RKGHIGMMDM LSMDLIKEF

Best Arabidopsis Sequence Match ( AT3G10530.1 )
(BLAST)

001: MEISSEDNNL MEKVLPPVEQ ESDVELETKV KKYLRGEGAN LETLKDKKLK TQLASREKLY GKSAKAAAKI EKWLLPAEAG YLETEGLEKT WRVKQTDIAN
101: EVDILSSRNQ YDIVLPDFGP YKLDFTASGR HMLAGGRKGH LALLDMMNMS LIKEIQVRET VRDVAFLHND QFFAAAQKKY AYIYGRDGTE LHCLKERGPV
201: ARLRFLKNHF LLASVNMSGQ LHYQDVTHGG MVASIRTGKG RTDVMEVNPY NSVVGLGHSG GTVTMWKPTS QAPLVQMQCH PGPVSSVAFH PNGHLMATSG
301: KERKIKIWDL RKFEEVQTIH SFHAKTLSFS QKGLLAAGTG SFVQILGDSS GGSSHNYTRY MNHSMVKGYQ IEKVMFRPYE DVIGIGHSMG WSSILIPGSG
401: EPNFDSWVAN PFETSKQRRE KEVHSLLDKL PPETIMLDPS KIGAMRPSRR KEKPSRGEIE AEKEVAIEAA KSTELKNKTK GRNKPSKRTK KKKEMVENAK
501: RTFPEQEHNT AIKKRRIVED AAAELPTSLK RFARKN

Arabidopsis Description

F18K10.11 protein [Source:UniProtKB/TrEMBL;Acc:Q9LPP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.